RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 NPAS4Q8IUM7 802 aa24.41■■□□□ 1.5
TRIM65-202ENST00000540128 C2orf40Q9H1Z8 148 aa24.41■■□□□ 1.5
TRIM65-202ENST00000540128 FZD8Q9H461 694 aa24.41■■□□□ 1.5
TRIM65-202ENST00000540128 AGPAT5Q9NUQ2 364 aa24.41■■□□□ 1.5
TRIM65-202ENST00000540128 RNF216Q9NWF9 866 aaPredicted RBP24.41■■□□□ 1.5
TRIM65-202ENST00000540128 DACT1Q9NYF0 836 aa24.41■■□□□ 1.5
TRIM65-202ENST00000540128 ODF2LQ9ULJ1 636 aa24.41■■□□□ 1.5
TRIM65-202ENST00000540128 YBX2Q9Y2T7 364 aaKnown RBP24.41■■□□□ 1.5
TRIM65-202ENST00000540128 PTPRSQ13332 1948 aa24.41■■□□□ 1.5
TRIM65-202ENST00000540128 LRRIQ4A6NIV6 560 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 INO80B-WBP1J3KQ70 363 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 CMA1P23946 247 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 AXLP30530 894 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 STAT6P42226 847 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 AMHR2Q16671 573 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 FAM187BQ17R55 369 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 PPP4R3CPQ6ZMV5 832 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 DEPTORQ8TB45 409 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 ELAC1Q9H777 363 aaKnown RBP24.4■■□□□ 1.5
TRIM65-202ENST00000540128 RBM19Q9Y4C8 960 aaKnown RBP24.4■■□□□ 1.5
TRIM65-202ENST00000540128 INSL6Q9Y581 213 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 LAMA3Q16787 3333 aa24.4■■□□□ 1.5
TRIM65-202ENST00000540128 A0A0U1RQF3 1178 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 TLL1O43897 1013 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 STAG3L1P0CL83 205 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 PLS3P13797 630 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 MYOGP15173 224 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 NPTX2P47972 431 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 EFNA5P52803 228 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 GIT2Q14161 759 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 DHX8Q14562 1220 aaKnown RBP24.39■■□□□ 1.49
TRIM65-202ENST00000540128 SV2BQ7L1I2 683 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 ZBTB8OSQ8IWT0 167 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 SPIRE2Q8WWL2 714 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 TIFAQ96CG3 184 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 ZBED2Q9BTP6 218 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 CUEDC2Q9H467 287 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 TSHZ2Q9NRE2 1034 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 FAM13BQ9NYF5 915 aa24.39■■□□□ 1.49
TRIM65-202ENST00000540128 NPHP3-ACAD11A0A0J9YXS1 232 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 TSPAN1O60635 241 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 ZNF131P52739 623 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 DMP1Q13316 513 aaPredicted RBP24.38■■□□□ 1.49
TRIM65-202ENST00000540128 FAM117BQ6P1L5 589 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 PDILTQ8N807 584 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 IQUBQ8NA54 791 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 SP7Q8TDD2 431 aaPredicted RBP24.38■■□□□ 1.49
TRIM65-202ENST00000540128 KCNN1Q92952 543 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 PRIMPOLQ96LW4 560 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 REEP2Q9BRK0 252 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 CCDC113Q9H0I3 377 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 PRMT7Q9NVM4 692 aaPredicted RBP24.38■■□□□ 1.49
TRIM65-202ENST00000540128 CHMP5Q9NZZ3 219 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 ARHGAP28Q9P2N2 729 aa24.38■■□□□ 1.49
TRIM65-202ENST00000540128 ADGRA3Q8IWK6 1321 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 FAM237AA0A1B0GTK4 181 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 A0A1W2PQ27 194 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 A0A1W2PQ64 194 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 A0A1W2PQD8 194 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 SFI1A8K8P3 1242 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 ZNF623O75123 536 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 DGKIO75912 1065 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 ERLIN2O94905 339 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 UPP2O95045 317 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 PEX3P56589 373 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 NCBP1Q09161 790 aaKnown RBP24.37■■□□□ 1.49
TRIM65-202ENST00000540128 RAD51AP2Q09MP3 1159 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 ZNF598Q86UK7 904 aaKnown RBP24.37■■□□□ 1.49
TRIM65-202ENST00000540128 ECHDC2Q86YB7 292 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 ZNF689Q96CS4 500 aaPredicted RBP24.37■■□□□ 1.49
TRIM65-202ENST00000540128 CCDC51Q96ER9 411 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 PYM1Q9BRP8 204 aaKnown RBP24.37■■□□□ 1.49
TRIM65-202ENST00000540128 NKX2-4Q9H2Z4 354 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 TMEM134Q9H6X4 195 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 RC3H2Q9HBD1 1191 aaKnown RBP24.37■■□□□ 1.49
TRIM65-202ENST00000540128 KBTBD4Q9NVX7 518 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 TMEM161AQ9NX61 479 aa24.37■■□□□ 1.49
TRIM65-202ENST00000540128 PIN4Q9Y237 131 aaKnown RBP24.37■■□□□ 1.49
TRIM65-202ENST00000540128 MYMKA6NI61 221 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 ACKR2O00590 384 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 EOMESO95936 686 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 SKIP12755 728 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 MAPK6Q16659 721 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 LARSQ9P2J5 1176 aaKnown RBP24.36■■□□□ 1.49
TRIM65-202ENST00000540128 KCNH3Q9ULD8 1083 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 HPSEQ9Y251 543 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 PCDHB7Q9Y5E2 793 aa24.36■■□□□ 1.49
TRIM65-202ENST00000540128 A0A1B0GUA9 196 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 CCDC169A6NNP5 214 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 CA3P07451 260 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 ARF4P18085 180 aaPredicted RBP24.35■■□□□ 1.49
TRIM65-202ENST00000540128 UBXN11Q5T124 520 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 TWF2Q6IBS0 349 aaKnown RBP24.35■■□□□ 1.49
TRIM65-202ENST00000540128 DDX12PQ92771 950 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 DNAJC19Q96DA6 116 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 KIFC3Q9BVG8 833 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 TNMDQ9H2S6 317 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 TTYH1Q9H313 450 aaPredicted RBP24.35■■□□□ 1.49
TRIM65-202ENST00000540128 SEMA6BQ9H3T3 888 aa24.35■■□□□ 1.49
TRIM65-202ENST00000540128 SLC28A3Q9HAS3 691 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms