RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PCDHA10Q9Y5I2 948 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 EP300Q09472 2414 aaPredicted RBP16.8■□□□□ 0.28
USB1-203ENST00000539737 DNAH14Q0VDD8 3507 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 MSH4O15457 936 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 NARSO43776 548 aaKnown RBP16.79■□□□□ 0.28
USB1-203ENST00000539737 CYP3A4P08684 503 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 HOXB8P17481 243 aaPredicted RBP16.79■□□□□ 0.28
USB1-203ENST00000539737 XBP1P17861 261 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 PPM1AP35813 382 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 MTERF2Q49AM1 385 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 ODR4Q5SWX8 454 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
USB1-203ENST00000539737 NECAB1Q8N987 351 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 TDRD5Q8NAT2 981 aaKnown RBP16.79■□□□□ 0.28
USB1-203ENST00000539737 SLC22A17Q8WUG5 538 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 VPS54Q9P1Q0 977 aa16.79■□□□□ 0.28
USB1-203ENST00000539737 A0A087WZ62 844 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 A0A0U1RQF3 1178 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 HOXA2O43364 376 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 DTNBO60941 627 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 NPR3P17342 541 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 SLC11A1P49279 550 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
USB1-203ENST00000539737 ZNF280BQ86YH2 543 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 RSAD2Q8WXG1 361 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 TMEM169Q96HH4 297 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 FDXACB1Q9BRP7 624 aaPredicted RBP16.78■□□□□ 0.28
USB1-203ENST00000539737 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 DISC1Q9NRI5 854 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 TBC1D13Q9NVG8 400 aa16.78■□□□□ 0.28
USB1-203ENST00000539737 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
USB1-203ENST00000539737 DMXL1Q9Y485 3027 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 PROB1E7EW31 1015 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 CTDNEP1O95476 244 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 MCM2P49736 904 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 NLRP5P59047 1200 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 SETQ01105 290 aaPredicted RBP16.77■□□□□ 0.28
USB1-203ENST00000539737 GALNT17Q6IS24 598 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 UBALD2Q8IYN6 164 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 NSUN7Q8NE18 718 aaKnown RBP16.77■□□□□ 0.28
USB1-203ENST00000539737 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.28
USB1-203ENST00000539737 TBC1D22BQ9NU19 505 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 ORC3Q9UBD5 711 aaPredicted RBP16.77■□□□□ 0.28
USB1-203ENST00000539737 COL4A3Q01955 1670 aa16.77■□□□□ 0.28
USB1-203ENST00000539737 F8W810 466 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 MAGEB2O15479 319 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 N4BP1O75113 896 aaKnown RBP16.76■□□□□ 0.27
USB1-203ENST00000539737 STBD1O95210 358 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 EOMESO95936 686 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 NBL1P41271 181 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 MTHFRP42898 656 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 PHKA2P46019 1235 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 ALDH7A1P49419 539 aaKnown RBP16.76■□□□□ 0.27
USB1-203ENST00000539737 ITIH3Q06033 890 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 PTPN14Q15678 1187 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 TWF2Q6IBS0 349 aaKnown RBP16.76■□□□□ 0.27
USB1-203ENST00000539737 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
USB1-203ENST00000539737 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 NECTIN4Q96NY8 510 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 CEP131Q9UPN4 1083 aa16.76■□□□□ 0.27
USB1-203ENST00000539737 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
USB1-203ENST00000539737 ZNF292O60281 2723 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 WDR64B1ANS9 1081 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 C2CD2LO14523 706 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 DDHD2O94830 711 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 TDP2O95551 362 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 GALTP07902 379 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 CTSAP10619 480 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 TBC1D8BQ0IIM8 1120 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 TARBP2Q15633 366 aaKnown RBP16.75■□□□□ 0.27
USB1-203ENST00000539737 ATAT1Q5SQI0 421 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 TAS1R1Q7RTX1 841 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 ZDHHC14Q8IZN3 488 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 ADSSL1Q8N142 457 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 ZNF579Q8NAF0 562 aaKnown RBP16.75■□□□□ 0.27
USB1-203ENST00000539737 DAGLBQ8NCG7 672 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
USB1-203ENST00000539737 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
USB1-203ENST00000539737 PCDHA4Q9UN74 947 aa16.75■□□□□ 0.27
USB1-203ENST00000539737 GAS7O60861 476 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 OFD1O75665 1012 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 CNPP09543 421 aaKnown RBP16.74■□□□□ 0.27
USB1-203ENST00000539737 TMOD1P28289 359 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 ST3GAL1Q11201 340 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 LRCH2Q5VUJ6 765 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 CABP7Q86V35 215 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 RHPN2Q8IUC4 686 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 SIX5Q8N196 739 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 FAM167AQ96KS9 214 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 AIFM3Q96NN9 605 aa16.74■□□□□ 0.27
USB1-203ENST00000539737 KLHL5Q96PQ7 755 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms