RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 RAVER2Q9HCJ3 691 aaKnown RBP15.24■□□□□ 0.03
UBE3B-210ENST00000539599 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 H0YGN5 161 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-210ENST00000539599 SGPL1O95470 568 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ALAS1P13196 640 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 HSPA9P38646 679 aaKnown RBP15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ZNF131P52739 623 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 DLGAP5Q15398 846 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 C1orf220Q5T0J3 134 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 MICALL1Q8N3F8 863 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 BBXQ8WY36 941 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ATP6V1G3Q96LB4 118 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 PCDHB18PQ96TA0 734 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 MRIQ9BWK5 157 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ZNF341Q9BYN7 854 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 VCPKMTQ9H867 229 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 CNOT8Q9UFF9 292 aaKnown RBP15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ATP8A1Q9Y2Q0 1164 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 NFS1Q9Y697 457 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ATP9AO75110 1047 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 EGFRP00533 1210 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 HOXA7P31268 230 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-210ENST00000539599 SP4Q02446 784 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 EPC2Q52LR7 807 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 C2CD6Q53TS8 623 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 C10orf76Q5T2E6 689 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 RUBCNQ92622 972 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 C18orf8Q96DM3 657 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 TMOD2Q9NZR1 351 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 SUCLA2Q9P2R7 463 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ZNF536O15090 1300 aa15.24■□□□□ 0.03
UBE3B-210ENST00000539599 ADRB2P07550 413 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-210ENST00000539599 PEX3P56589 373 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 MRPS9P82933 396 aaKnown RBP15.23■□□□□ 0.03
UBE3B-210ENST00000539599 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-210ENST00000539599 PPATQ06203 517 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 DHX9Q08211 1270 aaKnown RBP15.23■□□□□ 0.03
UBE3B-210ENST00000539599 RPUSD2Q8IZ73 545 aaKnown RBP15.23■□□□□ 0.03
UBE3B-210ENST00000539599 WHAMMQ8TF30 809 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 RFFLQ8WZ73 363 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 DHX38Q92620 1227 aaKnown RBP15.23■□□□□ 0.03
UBE3B-210ENST00000539599 WNK4Q96J92 1243 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 KIF13BQ9NQT8 1826 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 SNX24Q9Y343 169 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 EBAG9O00559 213 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 FTLP02792 175 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-210ENST00000539599 SHBGP04278 402 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 SKOR1P84550 965 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 DAB2IPQ5VWQ8 1189 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 LLGL2Q6P1M3 1020 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 CBWD2Q8IUF1 395 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 ATP8B4Q8TF62 1192 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 KAT2BQ92831 832 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 MXRA8Q9BRK3 442 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
UBE3B-210ENST00000539599 PPP1R37O75864 691 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 KRT13P13646 458 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 SSTR3P32745 418 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-210ENST00000539599 MESDQ14696 234 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 SLC15A2Q16348 729 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 IFI16Q16666 785 aaKnown RBP15.22■□□□□ 0.03
UBE3B-210ENST00000539599 SLC47A2Q86VL8 602 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 MREGQ8N565 214 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 TMBIM4Q9HC24 238 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 GTPBP10A4D1E9 387 aaKnown RBP15.22■□□□□ 0.03
UBE3B-210ENST00000539599 ANKRD63C9JTQ0 380 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 DHX15O43143 795 aaKnown RBP15.22■□□□□ 0.03
UBE3B-210ENST00000539599 CYP26A1O43174 497 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 CAP2P40123 477 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 B3GNT9Q6UX72 402 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 KDM7AQ6ZMT4 941 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 MDM1Q8TC05 714 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 SEMA4DQ92854 862 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 TAAR1Q96RJ0 339 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 AGPAT1Q99943 283 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 NOVA2Q9UNW9 492 aaKnown RBP15.22■□□□□ 0.03
UBE3B-210ENST00000539599 MRPL11Q9Y3B7 192 aaKnown RBP15.22■□□□□ 0.03
UBE3B-210ENST00000539599 ALG6Q9Y672 507 aa15.22■□□□□ 0.03
UBE3B-210ENST00000539599 E7EVH7 732 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 SLC26A4O43511 780 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 TMEM253P0C7T8 217 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 LMNB1P20700 586 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 RARRES1P49788 294 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 POU5F1Q01860 360 aaKnown RBP15.21■□□□□ 0.03
UBE3B-210ENST00000539599 FBXW10Q5XX13 1052 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 RSBN1LQ6PCB5 846 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-210ENST00000539599 PPM1KQ8N3J5 372 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 LARGE2Q8N3Y3 721 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 HSPBP1Q9NZL4 362 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 HERC5Q9UII4 1024 aaKnown RBP15.21■□□□□ 0.03
UBE3B-210ENST00000539599 PTPN22Q9Y2R2 807 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 MAGEA9P43362 315 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 VAMP7P51809 220 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 PLTPP55058 493 aa15.21■□□□□ 0.03
UBE3B-210ENST00000539599 LMBRD2Q68DH5 695 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms