RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 RNF141Q8WVD5 230 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 LINC01599Q8WXQ3 324 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 KCTD13Q8WZ19 329 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 KLHL6Q8WZ60 621 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 GOLGA1Q92805 767 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 PAWRQ96IZ0 340 aaKnown RBP4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 CCDC140Q96MF4 163 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 HAUS7Q99871 368 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 ISCA1Q9BUE6 129 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 OSBPL5Q9H0X9 879 aaPredicted RBP4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 KIAA1586Q9HCI6 787 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 TRIM39Q9HCM9 518 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 C1orf112Q9NSG2 853 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 TRMT13Q9NUP7 481 aaKnown RBP4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 TJP2Q9UDY2 1190 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 PTPN22Q9Y2R2 807 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 UGGT1Q9NYU2 1555 aa4.48□□□□□ -1.69
AC055720.1-201ENST00000539552 ITIH6Q6UXX5 1313 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 WRNQ14191 1432 aaPredicted RBP eCLIP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 FZD9O00144 591 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 NEMP1O14524 444 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 RGS13O14921 159 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 TLR5O60602 858 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 KPNA6O60684 536 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 MTA2O94776 668 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 PRKD3O94806 890 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 CNOT4O95628 575 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 EPHX1P07099 455 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 ZKSCAN1P17029 563 aaPredicted RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 VCAM1P19320 739 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 GRK6P43250 576 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 TM4SF4P48230 202 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 CLK1P49759 484 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 ZBED6P86452 979 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 FAPQ12884 760 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 TDRD10Q5VZ19 366 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 ARMC3Q5W041 872 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 CPZQ66K79 652 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 RNF111Q6ZNA4 994 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 CHST15Q7LFX5 561 aaPredicted RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 OTOP3Q7RTS5 596 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 DDX53Q86TM3 631 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 MCATQ8IVS2 390 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 SLFN12Q8IYM2 578 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 BVESQ8NE79 360 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 CHST13Q8NET6 341 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 DNAJB8Q8NHS0 232 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 FRS2Q8WU20 508 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 CYB5D2Q8WUJ1 264 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 CCT6BQ92526 530 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 RPGRQ92834 1020 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 GCC1Q96CN9 775 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 FUBP3Q96I24 572 aaKnown RBP eCLIP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 EIF2AK1Q9BQI3 630 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 NAA15Q9BXJ9 866 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 MTFR1LQ9H019 292 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 SLITRK6Q9H5Y7 841 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 SH3GLB2Q9NR46 395 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 ARHGEF4Q9NR80 690 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 WHRNQ9P202 907 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 SAP30BPQ9UHR5 308 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 NAP1L2Q9ULW6 460 aaPredicted RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 AKT3Q9Y243 479 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 TTLL3Q9Y4R7 772 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 PCDHGB3Q9Y5G1 929 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 LRRFIP2Q9Y608 721 aaKnown RBP4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 TAF6LQ9Y6J9 622 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 LAMB4A4D0S4 1761 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 KIDINS220Q9ULH0 1771 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 PRUNE2Q8WUY3 3088 aa4.47□□□□□ -1.69
AC055720.1-201ENST00000539552 FAM135AQ9P2D6 1515 aa4.46□□□□□ -1.69
AC055720.1-201ENST00000539552 TMEM131LA2VDJ0 1609 aa4.46□□□□□ -1.69
AC055720.1-201ENST00000539552 MROH1Q8NDA8 1641 aa4.46□□□□□ -1.69
AC055720.1-201ENST00000539552 PIEZO1Q92508 2521 aa4.46□□□□□ -1.69
AC055720.1-201ENST00000539552 MAP3K5Q99683 1374 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 LTFP02788 710 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 ITGAVP06756 1048 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 HNRNPCP07910 306 aaKnown RBP eCLIP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 JMJD7P0C870 316 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 MYBL2P10244 700 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 NCAM1P13591 858 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 RHCEP18577 417 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 ATICP31939 592 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 TSPAN7P41732 249 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 PCBP3P57721 371 aaKnown RBP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 RTP1P59025 263 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 IL2P60568 153 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 KRT85P78386 507 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 OCRLQ01968 901 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 RHDQ02161 417 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 PRKG2Q13237 762 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 LAPTM5Q13571 262 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 KIF22Q14807 665 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 INAVAQ3KP66 663 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 TUBB8Q3ZCM7 444 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 ATP13A4Q4VNC1 1196 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 PRR16Q569H4 304 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 INTS11Q5TA45 600 aaKnown RBP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 IQSEC1Q6DN90 963 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms