RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZBED1O96006 694 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 KLRC3Q07444 240 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 PCGF5Q86SE9 256 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 NSUN4Q96CB9 384 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 C11orf70Q9BRQ4 267 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 PHF20Q9BVI0 1012 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 MLXIPLQ9NP71 852 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 MORC2Q9Y6X9 1032 aaPredicted RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 MYO3AQ8NEV4 1616 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 A0A1B0GTH6 734 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 KIF3CO14782 793 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 FDPSP14324 419 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 JAK3P52333 1124 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 INTS2Q9H0H0 1204 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 Q9H521 79 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 NGRNQ9NPE2 291 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 ZNF185O15231 689 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 ZRANB2O95218 330 aaKnown RBP eCLIP15.54■□□□□ 0.08
CACNB1-206ENST00000539338 RFC1P35251 1148 aaPredicted RBP15.54■□□□□ 0.08
CACNB1-206ENST00000539338 SLFN12LQ6IEE8 588 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 TMEM270Q6UE05 265 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 FAM47EQ6ZV65 393 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 GLYCTKQ8IVS8 523 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 NEDD1Q8NHV4 660 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 URGCPQ8TCY9 931 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 MAML1Q92585 1016 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 LRRC4Q9HBW1 653 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 NPHP3-ACAD11A0A0J9YXS1 232 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 C12orf60Q5U649 245 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 PDXDC1Q6P996 788 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 NUDT18Q6ZVK8 323 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 INTUQ9ULD6 942 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 REREQ9P2R6 1566 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 CTDNEP1O95476 244 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 MYO1EQ12965 1108 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 LIMA1Q9UHB6 759 aaKnown RBP15.54■□□□□ 0.08
CACNB1-206ENST00000539338 GPC2Q8N158 579 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 NUP85Q9BW27 656 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 PITPNM3Q9BZ71 974 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM9Q9C026 710 aa15.54■□□□□ 0.08
CACNB1-206ENST00000539338 TTC7AQ9ULT0 858 aaPredicted RBP15.54■□□□□ 0.08
CACNB1-206ENST00000539338 GOLGA8MH3BSY2 632 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 TJP3O95049 919 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 FTLP02792 175 aaPredicted RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 VAMP7P51809 220 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 ORC2Q13416 577 aaPredicted RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 NAALADL2Q58DX5 795 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 ZNF564Q8TBZ8 553 aaPredicted RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 RNF25Q96BH1 459 aaPredicted RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 DENND3A2RUS2 1198 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 FXR1P51114 621 aaKnown RBP eCLIP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 DPYDQ12882 1025 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 KCNB1Q14721 858 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 PPP6R3Q5H9R7 873 aaPredicted RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 BEND6Q5SZJ8 279 aaPredicted RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 SAAL1Q96ER3 474 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 ATP6V0A4Q9HBG4 840 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 VCX3AQ9NNX9 186 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 IPO11Q9UI26 975 aaKnown RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 TTLL4Q14679 1199 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 YAF2Q8IY57 180 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 DEPDC1BQ8WUY9 529 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 SLC4A1P02730 911 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 PMS2P54278 862 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 LRGUKQ96M69 825 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 PLA2G12BQ9BX93 195 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 NRXN1Q9ULB1 1477 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 WDR64B1ANS9 1081 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 RASA4BC9J798 803 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 RASA4O43374 803 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 PDE1CQ14123 709 aaPredicted RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 SRRM1Q8IYB3 904 aaKnown RBP15.53■□□□□ 0.08
CACNB1-206ENST00000539338 SPATA4Q8NEY3 305 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 TLK1Q9UKI8 766 aa15.53■□□□□ 0.08
CACNB1-206ENST00000539338 CLDN3O15551 220 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 GCLCP48506 637 aaPredicted RBP15.52■□□□□ 0.08
CACNB1-206ENST00000539338 SURF1Q15526 300 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 ZNF667Q5HYK9 610 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 TTC17Q96AE7 1141 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 EIF2AK1Q9BQI3 630 aaKnown RBP15.52■□□□□ 0.08
CACNB1-206ENST00000539338 LXNQ9BS40 222 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 KATNAL1Q9BW62 490 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM10Q9UDY6 481 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 HERC5Q9UII4 1024 aaKnown RBP15.52■□□□□ 0.08
CACNB1-206ENST00000539338 SATB1Q01826 763 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 DGKZQ13574 1117 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 HP1BP3Q5SSJ5 553 aaPredicted RBP15.52■□□□□ 0.08
CACNB1-206ENST00000539338 TADA2BQ86TJ2 420 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 SKA2Q8WVK7 121 aaPredicted RBP15.52■□□□□ 0.08
CACNB1-206ENST00000539338 FAF2Q96CS3 445 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 GLT1D1Q96MS3 346 aa15.52■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM56Q9BRZ2 755 aaKnown RBP15.52■□□□□ 0.08
CACNB1-206ENST00000539338 LDHAP00338 332 aaKnown RBP15.52■□□□□ 0.07
CACNB1-206ENST00000539338 ESRRAP11474 423 aaPredicted RBP15.52■□□□□ 0.07
CACNB1-206ENST00000539338 COG7P83436 770 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 TAF11Q15544 211 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 SIX6OS1Q8N1H7 587 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 LRRC1Q9BTT6 524 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms