RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 RPGRIP1Q96KN7 1286 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 SLKQ9H2G2 1235 aaPredicted RBP14.02□□□□□ -0.17
VAMP1-206ENST00000538970 FAM105AQ9NUU6 356 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 ZFHX2Q9C0A1 2572 aaPredicted RBP14.02□□□□□ -0.17
VAMP1-206ENST00000538970 PLXNA3P51805 1871 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 MEIS3P2A8K0S8 358 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 NT5C1B-RDH14C9J2C7 533 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 TBX3O15119 743 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 CCNT1O60563 726 aaKnown RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 DTNBO60941 627 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 CTDNEP1O95476 244 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 SKIP12755 728 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 ALDH7A1P49419 539 aaKnown RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 RAB27AP51159 221 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 VCPP55072 806 aaKnown RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 NPEPPSP55786 919 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 ZXDAP98168 799 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 PIK3AP1Q6ZUJ8 805 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 CATSPER4Q7RTX7 472 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 TMEM173Q86WV6 379 aaPredicted RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 MRPL43Q8N983 215 aaKnown RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 ZNF579Q8NAF0 562 aaKnown RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 SLC7A3Q8WY07 619 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 CASP10Q92851 521 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 TMEM169Q96HH4 297 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 NAP1L4Q99733 375 aaKnown RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 LXNQ9BS40 222 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 APOL5Q9BWW9 433 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 DHX33Q9H6R0 707 aaKnown RBP14.01□□□□□ -0.17
VAMP1-206ENST00000538970 IFT122Q9HBG6 1241 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 AGPAT5Q9NUQ2 364 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 PPME1Q9Y570 386 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 COL4A3BPQ9Y5P4 624 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 HCFC2Q9Y5Z7 792 aa14.01□□□□□ -0.17
VAMP1-206ENST00000538970 ZDBF2Q9HCK1 2354 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 ZNF623O75123 536 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 ZC3H11AO75152 810 aaKnown RBP eCLIP14□□□□□ -0.17
VAMP1-206ENST00000538970 P4HBP07237 508 aaKnown RBP14□□□□□ -0.17
VAMP1-206ENST00000538970 HOXB8P17481 243 aaPredicted RBP14□□□□□ -0.17
VAMP1-206ENST00000538970 RFC5P40937 340 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 POLGP54098 1239 aaPredicted RBP14□□□□□ -0.17
VAMP1-206ENST00000538970 SPIRE1Q08AE8 756 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 LONRF3Q496Y0 759 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 EARS2Q5JPH6 523 aaKnown RBP14□□□□□ -0.17
VAMP1-206ENST00000538970 GLB1LQ6UWU2 654 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 ASCL5Q7RTU5 278 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 SUGP1Q8IWZ8 645 aaKnown RBP14□□□□□ -0.17
VAMP1-206ENST00000538970 CEP170P1Q96L14 293 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 ZBP1Q9H171 429 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 TBC1D13Q9NVG8 400 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 DMDP11532 3685 aa14□□□□□ -0.17
VAMP1-206ENST00000538970 CARNS1A5YM72 827 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 CLASP2O75122 1294 aaKnown RBP13.99□□□□□ -0.17
VAMP1-206ENST00000538970 OFD1O75665 1012 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 YWHABP31946 246 aaKnown RBP13.99□□□□□ -0.17
VAMP1-206ENST00000538970 AK2P54819 239 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 ANAPC15P60006 121 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 EPHA7Q15375 998 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 NOMO2Q5JPE7 1267 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 NCAPH2Q6IBW4 605 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 C4orf19Q8IY42 314 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 EXOC8Q8IYI6 725 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 FBXL6Q8N531 539 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 BCL7CQ8WUZ0 217 aaPredicted RBP13.99□□□□□ -0.17
VAMP1-206ENST00000538970 PRPF31Q8WWY3 499 aaKnown RBP13.99□□□□□ -0.17
VAMP1-206ENST00000538970 PSPC1Q8WXF1 523 aaKnown RBP13.99□□□□□ -0.17
VAMP1-206ENST00000538970 TNFRSF25Q93038 417 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 TMEM143Q96AN5 459 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 IGSF21Q96ID5 467 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 NRDE2Q9H7Z3 1164 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 MINDY3Q9H8M7 445 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
VAMP1-206ENST00000538970 ORC3Q9UBD5 711 aaPredicted RBP13.99□□□□□ -0.17
VAMP1-206ENST00000538970 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 INPP5FQ9Y2H2 1132 aa13.99□□□□□ -0.17
VAMP1-206ENST00000538970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.98□□□□□ -0.17
VAMP1-206ENST00000538970 H0Y858 1186 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 GAS2O43903 313 aaKnown RBP13.98□□□□□ -0.17
VAMP1-206ENST00000538970 B4GALT3O60512 393 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 GALTP07902 379 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 CTSAP10619 480 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 FDPSP14324 419 aaKnown RBP13.98□□□□□ -0.17
VAMP1-206ENST00000538970 CA8P35219 290 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 LAMTOR4Q0VGL1 99 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 NR5A1Q13285 461 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 EMC2Q15006 297 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 ANKRD1Q15327 319 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 PTPN21Q16825 1174 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 UBXN11Q5T124 520 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 SRGAP1Q7Z6B7 1085 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 DDX53Q86TM3 631 aaKnown RBP13.98□□□□□ -0.17
VAMP1-206ENST00000538970 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 VPS52Q8N1B4 723 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 WASF1Q92558 559 aa13.98□□□□□ -0.17
VAMP1-206ENST00000538970 ATOH1Q92858 354 aaPredicted RBP13.98□□□□□ -0.17
VAMP1-206ENST00000538970 PGBD4Q96DM1 585 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms