RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CCDC195A0A1B0GUA6 201 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ANO9A1A5B4 782 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 SUPT3HO75486 399 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 HLA-DPA1P20036 260 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 CRKLP46109 303 aaKnown RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 KIAA1755Q5JYT7 1200 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 SARM1Q6SZW1 724 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 TEX9Q8N6V9 391 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 NLRP4Q96MN2 994 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 MTRQ99707 1265 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 MAGEB5Q9BZ81 275 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 STRIP2Q9ULQ0 834 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 SUGT1Q9Y2Z0 365 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 SRGAP2O75044 1071 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 CALB1P05937 261 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 UBE2Q1Q7Z7E8 422 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 RAPGEF5Q92565 580 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 HEMGNQ9BXL5 484 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ADA2Q9NZK5 511 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 LIFRP42702 1097 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 PROM2Q8N271 834 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 TMEM35BQ8NCS4 154 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 GANCQ8TET4 914 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 LGALS16A8MUM7 142 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 GOLGA8MH3BSY2 632 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 CD2BP2O95400 341 aaKnown RBP10.57□□□□□ -0.72
COL4A6-208ENST00000538570 THEM5Q8N1Q8 247 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 ULK4Q96C45 1275 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 TGS1Q96RS0 853 aaKnown RBP10.57□□□□□ -0.72
COL4A6-208ENST00000538570 MXD3Q9BW11 206 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 BHMT2Q9H2M3 363 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 NDE1Q9NXR1 346 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 PI4KBQ9UBF8 816 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 GRID2IPA4D2P6 1211 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 SMAPO00193 183 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 JAK3P52333 1124 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 ARFIP2P53365 341 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-208ENST00000538570 RASSF3Q86WH2 238 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 NLGN1Q8N2Q7 840 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 IL17RAQ96F46 866 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 FAM161BQ96MY7 647 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 DIAPH2O60879 1101 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 GPR162Q16538 588 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 PPP4R4Q6NUP7 873 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 KIAA1586Q9HCI6 787 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 ITGB3BPQ13352 177 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-208ENST00000538570 PTK2BQ14289 1009 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 TBC1D9BQ66K14 1250 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 OSBP2Q969R2 916 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 TRAF3IP3Q9Y228 551 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 HEY1Q9Y5J3 304 aa10.57□□□□□ -0.72
COL4A6-208ENST00000538570 MARK3P27448 753 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 TMEM154Q6P9G4 183 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 EEPD1Q7L9B9 569 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 SLC26A7Q8TE54 656 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 SFMBT1Q9UHJ3 866 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 LOC102724428A0A0B4J2F2 783 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 POTEB3A0JP26 581 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 SFI1A8K8P3 1242 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 HOXA13P31271 388 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 IL6STP40189 918 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 SIK1P57059 783 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 RNF219Q5W0B1 726 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 OPTNQ96CV9 577 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 DYNLL2Q96FJ2 89 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 TMEM51Q9NW97 253 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 DCTN4Q9UJW0 460 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 CDV3Q9UKY7 258 aaKnown RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 HPCAL4Q9UM19 191 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 ARHGAP26Q9UNA1 814 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 IQCA1LA6NCM1 817 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 TNFAIP2Q03169 654 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 GFPT1Q06210 699 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 AP3B2Q13367 1082 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 CCNYL1Q8N7R7 359 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 GDAQ9Y2T3 454 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 UBE4BO95155 1302 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 FAM95CA0A1B0GW59 222 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 MEFVO15553 781 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 FBXW4P57775 412 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 CARD9Q9H257 536 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 CHMP2BQ9UQN3 213 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 LRRC53A6NM62 1247 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 EFCAB14O75071 495 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 LARGE1O95461 756 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 RECQLP46063 649 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 MRPL28Q13084 256 aaKnown RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 LBRQ14739 615 aaKnown RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 PROSER3Q2NL68 480 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 ELMSAN1Q6PJG2 1045 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 PASD1Q8IV76 773 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 GSPT2Q8IYD1 628 aaKnown RBP10.56□□□□□ -0.72
COL4A6-208ENST00000538570 PPM1NQ8N819 430 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 ATP6V0A4Q9HBG4 840 aa10.56□□□□□ -0.72
COL4A6-208ENST00000538570 UBN2Q6ZU65 1347 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms