RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 SEC24CP53992 1094 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 MESDQ14696 234 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 FAM182AQ5T1J6 154 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 NT5DC3Q86UY8 548 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 SLC47A2Q86VL8 602 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 RPUSD2Q8IZ73 545 aaKnown RBP8.09□□□□□ -1.11
NECAP1-203ENST00000537796 SYTL5Q8TDW5 730 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-203ENST00000537796 UBLCP1Q8WVY7 318 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-203ENST00000537796 SEMA4DQ92854 862 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 PCDHB18PQ96TA0 734 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 FAM118BQ9BPY3 351 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 VIPAS39Q9H9C1 493 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 GDF3Q9NR23 364 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 STK32BQ9NY57 414 aa8.09□□□□□ -1.11
NECAP1-203ENST00000537796 MYO1CO00159 1063 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 PPP1R12BO60237 982 aaPredicted RBP8.09□□□□□ -1.12
NECAP1-203ENST00000537796 FTLP02792 175 aaPredicted RBP8.09□□□□□ -1.12
NECAP1-203ENST00000537796 TUBBP07437 444 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 GAP43P17677 238 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 RXRBP28702 533 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 YWHABP31946 246 aaKnown RBP8.09□□□□□ -1.12
NECAP1-203ENST00000537796 FSTL1Q12841 308 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 BAATQ14032 418 aaPredicted RBP8.09□□□□□ -1.12
NECAP1-203ENST00000537796 C1orf220Q5T0J3 134 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 HAUS6Q7Z4H7 955 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 NIM1KQ8IY84 436 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 BSNDQ8WZ55 320 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 ZNF668Q96K58 619 aaPredicted RBP8.09□□□□□ -1.12
NECAP1-203ENST00000537796 RNPC3Q96LT9 517 aaKnown RBP8.09□□□□□ -1.12
NECAP1-203ENST00000537796 RMDN3Q96TC7 470 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 HSPBP1Q9NZL4 362 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 CTTNBP2NLQ9P2B4 639 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 TCEAL9Q9UHQ7 104 aa8.09□□□□□ -1.12
NECAP1-203ENST00000537796 VGLL3A8MV65 326 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 VAMP7P51809 220 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 TRIM7Q9C029 511 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 RPAP3Q9H6T3 665 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 AGO4Q9HCK5 861 aaKnown RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 MYOZ2Q9NPC6 264 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 CTDP1Q9Y5B0 961 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 PGRMC1O00264 195 aaKnown RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 SLC16A3O15427 465 aaKnown RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 MMEP08473 750 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 KRT13P13646 458 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 ECHS1P30084 290 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 PTGER2P43116 358 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 KCNJ1P48048 391 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 FKBP1AP62942 108 aaKnown RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 DHX9Q08211 1270 aaKnown RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 UAP1Q16222 522 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 ZNF572Q7Z3I7 529 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 VPS36Q86VN1 386 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 LMO3Q8TAP4 145 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 BCAS4Q8TDM0 211 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 CTNNBL1Q8WYA6 563 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-203ENST00000537796 CAPS2Q9BXY5 557 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 STK33Q9BYT3 514 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 FEM1BQ9UK73 627 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 FBXL5Q9UKA1 691 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 PTPN22Q9Y2R2 807 aa8.08□□□□□ -1.12
NECAP1-203ENST00000537796 PHF20L1A8MW92 1017 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ICAM1P05362 532 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 HARSP12081 509 aaKnown RBP8.07□□□□□ -1.12
NECAP1-203ENST00000537796 FERP16591 822 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 VCAM1P19320 739 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 TMOD1P28289 359 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ADSSP30520 456 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 NF2P35240 595 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 PRKCIP41743 596 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ZNF131P52739 623 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 PAK2Q13177 524 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 NOP9Q86U38 636 aaKnown RBP8.07□□□□□ -1.12
NECAP1-203ENST00000537796 TMEM130Q8N3G9 435 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 TATDN2Q93075 761 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 DNAJC17Q9NVM6 304 aaKnown RBP8.07□□□□□ -1.12
NECAP1-203ENST00000537796 DMAC2Q9NW81 257 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 PSD3Q9NYI0 1048 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 AMFRQ9UKV5 643 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 SNX24Q9Y343 169 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ASNSP08243 561 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ZBTB48P10074 688 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-203ENST00000537796 HSD17B3P37058 310 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 QARSP47897 775 aaKnown RBP8.07□□□□□ -1.12
NECAP1-203ENST00000537796 HMGCS2P54868 508 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 TNNC1P63316 161 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ARHGEF16Q5VV41 709 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 EMBQ6PCB8 327 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ZDHHC14Q8IZN3 488 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 PRPF38AQ8NAV1 312 aaKnown RBP8.07□□□□□ -1.12
NECAP1-203ENST00000537796 SCFD2Q8WU76 684 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 C18orf8Q96DM3 657 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 KREMEN1Q96MU8 473 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.07□□□□□ -1.12
NECAP1-203ENST00000537796 TMEM117Q9H0C3 514 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ZNRF3Q9ULT6 936 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 ATP8A1Q9Y2Q0 1164 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 FOXO6A8MYZ6 492 aa8.07□□□□□ -1.12
NECAP1-203ENST00000537796 EIF3DO15371 548 aaKnown RBP eCLIP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms