RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 PEX11GQ96HA9 241 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 CCDC34Q96HJ3 373 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 RCC1LQ96I51 464 aaKnown RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 BDH2Q9BUT1 245 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 IFT22Q9H7X7 185 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 HELLSQ9NRZ9 838 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 APEX2Q9UBZ4 518 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 XPO7Q9UIA9 1087 aaKnown RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 TMEM98Q9Y2Y6 226 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 SNX5Q9Y5X3 404 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 C7orf72A4D263 438 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 SH3D21A4FU49 640 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 SMTNL1A8MU46 457 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 FZD9O00144 591 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 NCAM2O15394 837 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 HRGP04196 525 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 GYS1P13807 737 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 RPL17P18621 184 aaKnown RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 SNX16P57768 344 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 BPIFB3P59826 476 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 TMPRSS15P98073 1019 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 PLP2Q04941 152 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 PCBP1Q15365 356 aaKnown RBP eCLIP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 TRIM61Q5EBN2 209 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 CYP26C1Q6V0L0 522 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 CCDC73Q6ZRK6 1079 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 SRGAP1Q7Z6B7 1085 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 DAAM2Q86T65 1068 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 ZNF513Q8N8E2 541 aaPredicted RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 NETO2Q8NC67 525 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 SMARCC2Q8TAQ2 1214 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 DEPTORQ8TB45 409 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 COG1Q8WTW3 980 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 ZFPM2Q8WW38 1151 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 HDAC2Q92769 488 aaKnown RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 TBC1D31Q96DN5 1066 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 FUBP3Q96I24 572 aaKnown RBP eCLIP5.05□□□□□ -1.63e-6■□□□□ 8.2
AC055720.2-201ENST00000537724 ZMAT2Q96NC0 199 aaKnown RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 NOX5Q96PH1 765 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 CENPOQ9BU64 300 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 WDR12Q9GZL7 423 aaKnown RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 MTFR1LQ9H019 292 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 LMAN2LQ9H0V9 348 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 RSAD1Q9HA92 442 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 ANKEF1Q9NU02 776 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 USP40Q9NVE5 1235 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 ARGLU1Q9NWB6 273 aaPredicted RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 SEL1LQ9UBV2 794 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 NUDT5Q9UKK9 219 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 APOBEC2Q9Y235 224 aaKnown RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 AKT3Q9Y243 479 aa5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 MAGED1Q9Y5V3 778 aaPredicted RBP5.05□□□□□ -1.6
AC055720.2-201ENST00000537724 GPRASP1Q5JY77 1395 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 ANKRD18BA2A2Z9 1011 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 M0R3H8 397 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 DNAJC8O75937 253 aaPredicted RBP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 KCNH1O95259 989 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 CD4P01730 458 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 CTNNA1P35221 906 aaKnown RBP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 COPAP53621 1224 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 G3BP1Q13283 466 aaKnown RBP eCLIP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 NCAPHQ15003 741 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 SEPT7Q16181 437 aaKnown RBP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 ZNF449Q6P9G9 518 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 VHLLQ6RSH7 139 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 B3GNT9Q6UX72 402 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 DBX2Q6ZNG2 339 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 NBPF5PQ86XG9 351 aaPredicted RBP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 ERC1Q8IUD2 1116 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 ANKRD18AQ8IVF6 992 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 COLGALT2Q8IYK4 626 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 TRIM63Q969Q1 353 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 SH3KBP1Q96B97 665 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 CENPTQ96BT3 561 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 VMP1Q96GC9 406 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 HIC2Q96JB3 615 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 NUDT16L1Q9BRJ7 211 aaKnown RBP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 CRB3Q9BUF7 120 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 MYLK2Q9H1R3 596 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 SLC12A5Q9H2X9 1139 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 ZCCHC17Q9NP64 241 aaKnown RBP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 GPRC5CQ9NQ84 441 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 CLEC1BQ9P126 229 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 FNIP2Q9P278 1114 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 STAP2Q9UGK3 403 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 SAP30BPQ9UHR5 308 aaKnown RBP5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 ZNF112Q9UJU3 913 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 SIT1Q9Y3P8 196 aa5.04□□□□□ -1.6
AC055720.2-201ENST00000537724 TRBV23OR9-2A0A075B6M9 112 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 ANKRD34BA5PLL1 514 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 EYA2O00167 538 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 NEMP1O14524 444 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 CPLX1O14810 134 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 NPHS1O60500 1241 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 GFPT2O94808 682 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 ZBTB7AO95365 584 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 ZBED1O96006 694 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 FUCA1P04066 466 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 NTRK1P04629 796 aa5.03□□□□□ -1.6
AC055720.2-201ENST00000537724 PLS3P13797 630 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms