RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 PABPC5Q96DU9 382 aaKnown RBP18.26■□□□□ 0.51
ATN1-203ENST00000537488 CPB2Q96IY4 423 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 INO80BQ9C086 356 aaPredicted RBP18.26■□□□□ 0.51
ATN1-203ENST00000537488 POLR3FQ9H1D9 316 aaPredicted RBP18.26■□□□□ 0.51
ATN1-203ENST00000537488 UPF2Q9HAU5 1272 aaKnown RBP18.26■□□□□ 0.51
ATN1-203ENST00000537488 CD320Q9NPF0 282 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 CHST12Q9NRB3 414 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 AGPAT5Q9NUQ2 364 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 DACT1Q9NYF0 836 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 PPME1Q9Y570 386 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 PCDHB12Q9Y5F1 795 aa18.26■□□□□ 0.51
ATN1-203ENST00000537488 PP2D1A8MPX8 630 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 B4GALT3O60512 393 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 PTGDRQ13258 359 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 COL19A1Q14993 1142 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 LEXMQ3ZCV2 418 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 NAALADL2Q58DX5 795 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 KCNT2Q6UVM3 1135 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 SRGAP1Q7Z6B7 1085 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 ABI1Q8IZP0 508 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 POLR3CQ9BUI4 534 aaPredicted RBP18.25■□□□□ 0.51
ATN1-203ENST00000537488 TUFT1Q9NNX1 390 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 INPP5FQ9Y2H2 1132 aa18.25■□□□□ 0.51
ATN1-203ENST00000537488 PER2O15055 1255 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 TBX10O75333 385 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 DGAT1O75907 488 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 EOMESO95936 686 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 CDC25AP30304 524 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 NRIP1P48552 1158 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 PTENP60484 403 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 CTC1Q2NKJ3 1217 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 PTCRAQ6ISU1 281 aaPredicted RBP18.24■□□□□ 0.51
ATN1-203ENST00000537488 AGMOQ6ZNB7 445 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 FAM43BQ6ZT52 329 aaPredicted RBP18.24■□□□□ 0.51
ATN1-203ENST00000537488 CDR2LQ86X02 465 aaPredicted RBP18.24■□□□□ 0.51
ATN1-203ENST00000537488 EXOC8Q8IYI6 725 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 LRRC43Q8N309 656 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 KHSRPQ92945 711 aaKnown RBP eCLIP18.24■□□□□ 0.51
ATN1-203ENST00000537488 CCDC43Q96MW1 224 aaKnown RBP18.24■□□□□ 0.51
ATN1-203ENST00000537488 EIF2AQ9BY44 585 aaKnown RBP18.24■□□□□ 0.51
ATN1-203ENST00000537488 AAASQ9NRG9 546 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
ATN1-203ENST00000537488 NOL7Q9UMY1 257 aaKnown RBP18.24■□□□□ 0.51
ATN1-203ENST00000537488 PCDHB2Q9Y5E7 798 aa18.24■□□□□ 0.51
ATN1-203ENST00000537488 ASAP2O43150 1006 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 B4GALT5O43286 388 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 HOXA2O43364 376 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 GAS2O43903 313 aaKnown RBP18.23■□□□□ 0.51
ATN1-203ENST00000537488 TSPAN1O60635 241 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 OFD1O75665 1012 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 LAG3P18627 525 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 RPA1P27694 616 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 TRAPPC10P48553 1259 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 AMHR2Q16671 573 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 TMEM173Q86WV6 379 aaPredicted RBP18.23■□□□□ 0.51
ATN1-203ENST00000537488 MICAL1Q8TDZ2 1067 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 BSNDQ8WZ55 320 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 USP20Q9Y2K6 914 aa18.23■□□□□ 0.51
ATN1-203ENST00000537488 TDRD15B5MCY1 1934 aaKnown RBP18.22■□□□□ 0.51
ATN1-203ENST00000537488 INO80B-WBP1J3KQ70 363 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 CCT6AP40227 531 aaKnown RBP18.22■□□□□ 0.51
ATN1-203ENST00000537488 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
ATN1-203ENST00000537488 ORC2Q13416 577 aaPredicted RBP18.22■□□□□ 0.51
ATN1-203ENST00000537488 ADAM15Q13444 863 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 PLPP4Q5VZY2 271 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 ZNF280BQ86YH2 543 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 SMG8Q8ND04 991 aaKnown RBP18.22■□□□□ 0.51
ATN1-203ENST00000537488 BCL7CQ8WUZ0 217 aaPredicted RBP18.22■□□□□ 0.51
ATN1-203ENST00000537488 ZNF558Q96NG5 402 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 NACC1Q96RE7 527 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 NRDE2Q9H7Z3 1164 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 TLR9Q9NR96 1032 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.22■□□□□ 0.51
ATN1-203ENST00000537488 TBC1D13Q9NVG8 400 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 DNAJB4Q9UDY4 337 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 LRWD1Q9UFC0 647 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 DBR1Q9UK59 544 aaKnown RBP18.22■□□□□ 0.51
ATN1-203ENST00000537488 HES2Q9Y543 173 aa18.22■□□□□ 0.51
ATN1-203ENST00000537488 GRXCR2A6NFK2 248 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 TTLL13PA6NNM8 815 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 HIDE1A8MVS5 230 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 FSCN2O14926 492 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 ZNF623O75123 536 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 GLP2RO95838 553 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.51
ATN1-203ENST00000537488 BCAR1P56945 870 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 MXD4Q14582 209 aaPredicted RBP18.21■□□□□ 0.51
ATN1-203ENST00000537488 PADI6Q6TGC4 694 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 MRPL10Q7Z7H8 261 aaKnown RBP18.21■□□□□ 0.51
ATN1-203ENST00000537488 SLC39A11Q8N1S5 342 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 VN1R2Q8NFZ6 395 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 MRPS27Q92552 414 aaKnown RBP18.21■□□□□ 0.51
ATN1-203ENST00000537488 GBP3Q9H0R5 595 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 KIAA1024Q9UPX6 916 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 SMC3Q9UQE7 1217 aa18.21■□□□□ 0.51
ATN1-203ENST00000537488 LRRIQ4A6NIV6 560 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms