RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PFKPQ01813 784 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 FCHSD1Q86WN1 690 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 CLASRPQ8N2M8 674 aaKnown RBP10.97□□□□□ -0.65
CPSF7-217ENST00000537162 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 PHKBQ93100 1093 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 NRDE2Q9H7Z3 1164 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 CDH7Q9ULB5 785 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 RAXQ9Y2V3 346 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 EVPLQ92817 2033 aa10.97□□□□□ -0.65
CPSF7-217ENST00000537162 WDR81Q562E7 1941 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 SMIM35A0A1B0GVV1 85 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 GPR182O15218 404 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 TEX28O15482 410 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 RPLP2P05387 115 aaKnown RBP10.96□□□□□ -0.65
CPSF7-217ENST00000537162 GNAT2P19087 354 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 CSRP1P21291 193 aaKnown RBP10.96□□□□□ -0.65
CPSF7-217ENST00000537162 SLC11A1P49279 550 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 CEP85Q6P2H3 762 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 MTHFD1LQ6UB35 978 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 TAS1R1Q7RTX1 841 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 ZNF598Q86UK7 904 aaKnown RBP10.96□□□□□ -0.65
CPSF7-217ENST00000537162 FGF13Q92913 245 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 OSMRQ99650 979 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 PHF20Q9BVI0 1012 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 NAPBQ9H115 298 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 ADAMTS10Q9H324 1103 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 VAT1LQ9HCJ6 419 aa10.96□□□□□ -0.65
CPSF7-217ENST00000537162 MRPS17Q9Y2R5 130 aaKnown RBP10.96□□□□□ -0.65
CPSF7-217ENST00000537162 SPAARA0A1B0GVQ0 90 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 FAM221BA6H8Z2 402 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 J3QKU1 62 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 FIBPO43427 364 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 FGD1P98174 961 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 KIZQ2M2Z5 673 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 WDR44Q5JSH3 913 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 POTEHQ6S545 545 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 GRASPQ7Z6J2 395 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-217ENST00000537162 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
CPSF7-217ENST00000537162 KIAA0319LQ8IZA0 1049 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 NME8Q8N427 588 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 ZNF843Q8N446 348 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 CHCHD4Q8N4Q1 142 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 ITFG1Q8TB96 612 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 LOXL4Q96JB6 756 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 PRKD2Q9BZL6 878 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 JMJD4Q9H9V9 463 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 VPS45Q9NRW7 570 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 NOTCH4Q99466 2003 aa10.95□□□□□ -0.66
CPSF7-217ENST00000537162 PLXNB3Q9ULL4 1909 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 CDX4O14627 284 aaPredicted RBP10.94□□□□□ -0.66
CPSF7-217ENST00000537162 RNF113AO15541 343 aaKnown RBP10.94□□□□□ -0.66
CPSF7-217ENST00000537162 GLUD1P00367 558 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 CHRNB1P11230 501 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 AK2P54819 239 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 GNPTABQ3T906 1256 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 LONRF3Q496Y0 759 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
CPSF7-217ENST00000537162 DAB2IPQ5VWQ8 1189 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 MTSS1LQ765P7 747 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 WDR5BQ86VZ2 330 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 PALB2Q86YC2 1186 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 FAM9BQ8IZU0 186 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 MDM1Q8TC05 714 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 SEPT1Q8WYJ6 367 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
CPSF7-217ENST00000537162 SMARCAD1Q9H4L7 1026 aa10.94□□□□□ -0.66
CPSF7-217ENST00000537162 MRPL17Q9NRX2 175 aaKnown RBP10.94□□□□□ -0.66
CPSF7-217ENST00000537162 RBM12Q9NTZ6 932 aaKnown RBP10.94□□□□□ -0.66
CPSF7-217ENST00000537162 ZFP37Q9Y6Q3 630 aaPredicted RBP10.94□□□□□ -0.66
CPSF7-217ENST00000537162 MEIS3P2A8K0S8 358 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 ORC4O43929 436 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 KRT38O76015 456 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 KCNA2P16389 499 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 KLRC1P26715 233 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 PXNP49023 591 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-217ENST00000537162 GPATCH4Q5T3I0 446 aaKnown RBP10.93□□□□□ -0.66
CPSF7-217ENST00000537162 Q6ZS52 159 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 ZNF280BQ86YH2 543 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 SPEM1Q8N4L4 309 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 LPPQ93052 612 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 UBL7Q96S82 380 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-217ENST00000537162 SENP7Q9BQF6 1050 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 IER2Q9BTL4 223 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 MRPL9Q9BYD2 267 aaKnown RBP10.93□□□□□ -0.66
CPSF7-217ENST00000537162 NACAP1Q9BZK3 213 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 GBP3Q9H0R5 595 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 JADE2Q9NQC1 790 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 TCP11L1Q9NUJ3 509 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 TBC1D13Q9NVG8 400 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 ASXL3Q9C0F0 2248 aa10.93□□□□□ -0.66
CPSF7-217ENST00000537162 FRMPD4Q14CM0 1322 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 NRG2O14511 850 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-217ENST00000537162 GPR32O75388 356 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 PAPSS2O95340 614 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-217ENST00000537162 ADH1AP07327 375 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 FGRP09769 529 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 CRYBB1P53674 252 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-217ENST00000537162 ODR4Q5SWX8 454 aa10.92□□□□□ -0.66
CPSF7-217ENST00000537162 CACNA2D4Q7Z3S7 1137 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms