RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 GPBP1Q86WP2 473 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 PSMD1Q99460 953 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 SMCHD1A6NHR9 2005 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 SIPA1L1O43166 1804 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 SMIM23A6NLE4 172 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 RAD51CO43502 376 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 UBOX5O94941 541 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 PLA2G4BP0C869 781 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 HSPA9P38646 679 aaKnown RBP15.1■□□□□ 0.01
LIG1-203ENST00000536218 PSMC6P62333 389 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 ATP11AP98196 1134 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 PABPC4Q13310 644 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■■□ 26.1
LIG1-203ENST00000536218 BIRC3Q13489 604 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 ZNF572Q7Z3I7 529 aaPredicted RBP15.1■□□□□ 0.01
LIG1-203ENST00000536218 RBM41Q96IZ5 413 aaKnown RBP15.1■□□□□ 0.01
LIG1-203ENST00000536218 TLR10Q9BXR5 811 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 FGFBP2Q9BYJ0 223 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 IFNAR2P48551 515 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 LACTBP83111 547 aaPredicted RBP15.1■□□□□ 0.01
LIG1-203ENST00000536218 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
LIG1-203ENST00000536218 LMNTD2Q8IXW0 634 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 GOPCQ9HD26 462 aa15.1■□□□□ 0.01
LIG1-203ENST00000536218 PACSIN2Q9UNF0 486 aaPredicted RBP15.1■□□□□ 0.01
LIG1-203ENST00000536218 PVALEFA0A1B0GWK0 134 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 CHMP2AO43633 222 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 FTCDO95954 541 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 EGFRP00533 1210 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 GSTA1P08263 222 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 KRT16P08779 473 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 DNM2P50570 870 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 COASYQ13057 564 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 MEA1Q16626 185 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 MTHFD1LQ6UB35 978 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 ZNF662Q6ZS27 426 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 LONP2Q86WA8 852 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 SLC17A8Q8NDX2 589 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 ZNF507Q8TCN5 953 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 KCNMB3Q9NPA1 279 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 FBXL5Q9UKA1 691 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 CNTNAP1P78357 1384 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 WNT10BO00744 389 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 CLSTN1O94985 981 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 MMEP08473 750 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 SETSIPP0DME0 302 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 PRLRP16471 622 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 AP3B2Q13367 1082 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 UAP1Q16222 522 aaPredicted RBP15.09■□□□□ 0.01
LIG1-203ENST00000536218 LRRC34Q8IZ02 419 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 TANGO6Q9C0B7 1094 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 PNMA2Q9UL42 364 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 TMX2Q9Y320 296 aa15.09■□□□□ 0.01
LIG1-203ENST00000536218 TPP2P29144 1249 aaPredicted RBP15.08■□□□□ 0.01
LIG1-203ENST00000536218 MAGEA1P43355 309 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 RASSF7Q02833 373 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 DGKZQ13574 1117 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 C1QTNF12Q5T7M4 302 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 CENPPQ6IPU0 288 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 CATSPER3Q86XQ3 398 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 SYCP3Q8IZU3 236 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 C1orf131Q8NDD1 294 aaKnown RBP15.08■□□□□ 0.01
LIG1-203ENST00000536218 JDP2Q8WYK2 163 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 DNAJC19Q96DA6 116 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 NT5C3AQ9H0P0 336 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 PIM2Q9P1W9 311 aa15.08■□□□□ 0.01
LIG1-203ENST00000536218 TNS1Q9HBL0 1735 aaKnown RBP15.08■□□□□ 0
LIG1-203ENST00000536218 TLDC2A0PJX2 215 aa15.08■□□□□ 0
LIG1-203ENST00000536218 ZBED6P86452 979 aa15.08■□□□□ 0
LIG1-203ENST00000536218 FAM26FQ5R3K3 315 aa15.08■□□□□ 0
LIG1-203ENST00000536218 RNF220Q5VTB9 566 aa15.08■□□□□ 0
LIG1-203ENST00000536218 ANO7Q6IWH7 933 aa15.08■□□□□ 0
LIG1-203ENST00000536218 TMEM154Q6P9G4 183 aa15.08■□□□□ 0
LIG1-203ENST00000536218 LRIG3Q6UXM1 1119 aa15.08■□□□□ 0
LIG1-203ENST00000536218 FAM114A1Q8IWE2 563 aa15.08■□□□□ 0
LIG1-203ENST00000536218 LRRC45Q96CN5 670 aa15.08■□□□□ 0
LIG1-203ENST00000536218 SUDS3Q9H7L9 328 aaPredicted RBP15.08■□□□□ 0
LIG1-203ENST00000536218 SALL4Q9UJQ4 1053 aa15.08■□□□□ 0
LIG1-203ENST00000536218 TRIM33Q9UPN9 1127 aa15.08■□□□□ 0
LIG1-203ENST00000536218 COL4A5P29400 1685 aa15.08■□□□□ 0
LIG1-203ENST00000536218 GOLGA6L10A0A0M3HER8 536 aa15.08■□□□□ 0
LIG1-203ENST00000536218 TRAF5O00463 557 aa15.08■□□□□ 0
LIG1-203ENST00000536218 HIP1RO75146 1068 aa15.08■□□□□ 0
LIG1-203ENST00000536218 EIF4A3P38919 411 aaKnown RBP15.08■□□□□ 0
LIG1-203ENST00000536218 IFI16Q16666 785 aaKnown RBP15.08■□□□□ 0
LIG1-203ENST00000536218 SLFN12Q8IYM2 578 aa15.08■□□□□ 0
LIG1-203ENST00000536218 NAP1L4Q99733 375 aaKnown RBP15.08■□□□□ 0
LIG1-203ENST00000536218 SYT15Q9BQS2 421 aa15.08■□□□□ 0
LIG1-203ENST00000536218 FAM207AQ9NSI2 230 aaPredicted RBP15.08■□□□□ 0
LIG1-203ENST00000536218 MSH4O15457 936 aa15.07■□□□□ 0
LIG1-203ENST00000536218 ALDH3A1P30838 453 aa15.07■□□□□ 0
LIG1-203ENST00000536218 KIF11P52732 1056 aa15.07■□□□□ 0
LIG1-203ENST00000536218 NCALDP61601 193 aa15.07■□□□□ 0
LIG1-203ENST00000536218 PTPROQ16827 1216 aa15.07■□□□□ 0
LIG1-203ENST00000536218 MYLK4Q86YV6 388 aaPredicted RBP15.07■□□□□ 0
LIG1-203ENST00000536218 MYOCDQ8IZQ8 938 aa15.07■□□□□ 0
LIG1-203ENST00000536218 CCDC155Q8N6L0 562 aa15.07■□□□□ 0
LIG1-203ENST00000536218 RPS6KC1Q96S38 1066 aa15.07■□□□□ 0
LIG1-203ENST00000536218 PPP1R12CQ9BZL4 782 aa15.07■□□□□ 0
LIG1-203ENST00000536218 MMRN2Q9H8L6 949 aa15.07■□□□□ 0
LIG1-203ENST00000536218 ADAM22Q9P0K1 906 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms