RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 SMAD4Q13485 552 aaKnown RBP17.14■□□□□ 0.33
PAAF1-207ENST00000536003 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 MICAL1Q8TDZ2 1067 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 MRPS27Q92552 414 aaKnown RBP17.14■□□□□ 0.33
PAAF1-207ENST00000536003 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 TRAIPQ9BWF2 469 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 C1QTNF1Q9BXJ1 281 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 FAM105AQ9NUU6 356 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 CD207Q9UJ71 328 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 NT5C1B-RDH14C9J2C7 533 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 MCM7P33993 719 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 PLCB3Q01970 1234 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 ADHFE1Q8IWW8 467 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 SLC39A11Q8N1S5 342 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 SMRP1Q8NCR6 262 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 TCF25Q9BQ70 676 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 TLE6Q9H808 572 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 PPME1Q9Y570 386 aa17.14■□□□□ 0.33
PAAF1-207ENST00000536003 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
PAAF1-207ENST00000536003 HOXA11P31270 313 aaPredicted RBP17.13■□□□□ 0.33
PAAF1-207ENST00000536003 AFF1P51825 1210 aaKnown RBP17.13■□□□□ 0.33
PAAF1-207ENST00000536003 DUSP6Q16828 381 aa17.13■□□□□ 0.33
PAAF1-207ENST00000536003 RNF149Q8NC42 400 aa17.13■□□□□ 0.33
PAAF1-207ENST00000536003 C8orf76Q96K31 380 aa17.13■□□□□ 0.33
PAAF1-207ENST00000536003 MTRQ99707 1265 aa17.13■□□□□ 0.33
PAAF1-207ENST00000536003 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
PAAF1-207ENST00000536003 ENTPD7Q9NQZ7 604 aa17.13■□□□□ 0.33
PAAF1-207ENST00000536003 LZTS1Q9Y250 596 aa17.13■□□□□ 0.33
PAAF1-207ENST00000536003 INPP5FQ9Y2H2 1132 aa17.13■□□□□ 0.33
PAAF1-207ENST00000536003 C19orf67A6NJJ6 358 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 PI4K2BG5E9Z4 385 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 ZC3H11AO75152 810 aaKnown RBP eCLIP17.12■□□□□ 0.33
PAAF1-207ENST00000536003 LYPLA2O95372 231 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 EYA4O95677 639 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 PPM1AP35813 382 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 BCAR1P56945 870 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 COASYQ13057 564 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 UBXN11Q5T124 520 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 OTUD6AQ7L8S5 288 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 PIGOQ8TEQ8 1089 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 BCL7CQ8WUZ0 217 aaPredicted RBP17.12■□□□□ 0.33
PAAF1-207ENST00000536003 LRFN3Q9BTN0 628 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 MRPL9Q9BYD2 267 aaKnown RBP17.12■□□□□ 0.33
PAAF1-207ENST00000536003 TBC1D13Q9NVG8 400 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 FAM50BQ9Y247 325 aa17.12■□□□□ 0.33
PAAF1-207ENST00000536003 TDRD15B5MCY1 1934 aaKnown RBP17.12■□□□□ 0.33
PAAF1-207ENST00000536003 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 RARRES1P49788 294 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 CAPSQ13938 189 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 KCNC3Q14003 757 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 AGMOQ6ZNB7 445 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 LLPHQ9BRT6 129 aaKnown RBP17.11■□□□□ 0.33
PAAF1-207ENST00000536003 SPG21Q9NZD8 308 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 PCDHB2Q9Y5E7 798 aa17.11■□□□□ 0.33
PAAF1-207ENST00000536003 GAS2O43903 313 aaKnown RBP17.1■□□□□ 0.33
PAAF1-207ENST00000536003 RAB27AP51159 221 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 NBR1Q14596 966 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 LLGL2Q6P1M3 1020 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 EXOC8Q8IYI6 725 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 TCP11Q8WWU5 503 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 USP15Q9Y4E8 981 aaPredicted RBP17.1■□□□□ 0.33
PAAF1-207ENST00000536003 TSPAN1O60635 241 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 ZNF623O75123 536 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 MED24O75448 989 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 OFD1O75665 1012 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
PAAF1-207ENST00000536003 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 GLB1LQ6UWU2 654 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 ZNF280BQ86YH2 543 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 FBXO18Q8NFZ0 1043 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 EIF2AQ9BY44 585 aaKnown RBP17.1■□□□□ 0.33
PAAF1-207ENST00000536003 GBP3Q9H0R5 595 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 NRDE2Q9H7Z3 1164 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 GPRC5CQ9NQ84 441 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
PAAF1-207ENST00000536003 USO1O60763 962 aaKnown RBP17.09■□□□□ 0.33
PAAF1-207ENST00000536003 DGAT1O75907 488 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 GLRA2P23416 452 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 PTENP60484 403 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 ZNF174Q15697 407 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 AMHR2Q16671 573 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
PAAF1-207ENST00000536003 POTEGQ6S5H5 508 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
PAAF1-207ENST00000536003 AUTS2Q8WXX7 1259 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 CPB2Q96IY4 423 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
PAAF1-207ENST00000536003 FOXP1Q9H334 677 aaPredicted RBP17.09■□□□□ 0.33
PAAF1-207ENST00000536003 PUF60Q9UHX1 559 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms