RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 BICD2Q8TD16 824 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 SLC22A17Q8WUG5 538 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
CHFR-211ENST00000535897 CRYGNQ8WXF5 182 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 RSPH1Q8WYR4 309 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 CCDC136Q96JN2 1154 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 NLRP4Q96MN2 994 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 HINFPQ9BQA5 517 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 RTP3Q9BQQ7 232 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 SH2D3AQ9BRG2 576 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 FDXACB1Q9BRP7 624 aaPredicted RBP9.05□□□□□ -0.96
CHFR-211ENST00000535897 TEKT3Q9BXF9 490 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 INO80BQ9C086 356 aaPredicted RBP9.05□□□□□ -0.96
CHFR-211ENST00000535897 ZMYND12Q9H0C1 365 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 DNAJB4Q9UDY4 337 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 IRAK3Q9Y616 596 aa9.05□□□□□ -0.96
CHFR-211ENST00000535897 C2CD2LO14523 706 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 MSH4O15457 936 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 GALTP07902 379 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 GBP2P32456 591 aaPredicted RBP9.04□□□□□ -0.96
CHFR-211ENST00000535897 SLC11A1P49279 550 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 RAB27AP51159 221 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 IRX6P78412 446 aaPredicted RBP9.04□□□□□ -0.96
CHFR-211ENST00000535897 EXOSC10Q01780 885 aaKnown RBP9.04□□□□□ -0.96
CHFR-211ENST00000535897 KRT32Q14532 448 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 PTPN14Q15678 1187 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 LETM2Q2VYF4 491 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 ELMSAN1Q6PJG2 1045 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 MIER3Q7Z3K6 550 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 CCDC148Q8NFR7 591 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 FEZF2Q8TBJ5 459 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 PGBD4Q96DM1 585 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 KLHL5Q96PQ7 755 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 FAM193BQ96PV7 902 aaPredicted RBP9.04□□□□□ -0.96
CHFR-211ENST00000535897 RIT2Q99578 217 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 UNC45AQ9H3U1 944 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 NRDE2Q9H7Z3 1164 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 KCNK12Q9HB15 430 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 MRPL17Q9NRX2 175 aaKnown RBP9.04□□□□□ -0.96
CHFR-211ENST00000535897 FAM105AQ9NUU6 356 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 SUCLA2Q9P2R7 463 aaPredicted RBP9.04□□□□□ -0.96
CHFR-211ENST00000535897 DUSP12Q9UNI6 340 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 C2orf16Q68DN1 1984 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 DMXL1Q9Y485 3027 aa9.04□□□□□ -0.96
CHFR-211ENST00000535897 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 TMEM150BA6NC51 233 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 MEIS3P2A8K0S8 358 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 DDX11L8A8MPP1 907 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 NARSO43776 548 aaKnown RBP9.03□□□□□ -0.96
CHFR-211ENST00000535897 URODP06132 367 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 CNPP09543 421 aaKnown RBP9.03□□□□□ -0.96
CHFR-211ENST00000535897 MYBP10242 640 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 NPR3P17342 541 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 CIITAP33076 1130 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 CLCN4P51793 760 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 RCAN1P53805 252 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 AK2P54819 239 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 NONOQ15233 471 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHFR-211ENST00000535897 ADCK5Q3MIX3 580 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 XKR3Q5GH77 459 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 SPECC1Q5M775 1068 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 ZNF410Q86VK4 478 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 ZNF280BQ86YH2 543 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 KSR1Q8IVT5 923 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 STAMQ92783 540 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 SLC5A5Q92911 643 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 PHKBQ93100 1093 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 GJA10Q969M2 543 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 LENG9Q96B70 501 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 VN1R3Q9BXE9 311 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 MAN1C1Q9NR34 630 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 FAM217BQ9NTX9 383 aaPredicted RBP9.03□□□□□ -0.96
CHFR-211ENST00000535897 IGSF9Q9P2J2 1179 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 STK39Q9UEW8 545 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 CA14Q9ULX7 337 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 PCDHB2Q9Y5E7 798 aa9.03□□□□□ -0.96
CHFR-211ENST00000535897 PRPF3O43395 683 aaKnown RBP9.02□□□□□ -0.97
CHFR-211ENST00000535897 B4GALT3O60512 393 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 OFD1O75665 1012 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 POMCP01189 267 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 LMNAP02545 664 aaKnown RBP9.02□□□□□ -0.97
CHFR-211ENST00000535897 ALDH2P05091 517 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 ADH1AP07327 375 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 HMGB1P09429 215 aaKnown RBP9.02□□□□□ -0.97
CHFR-211ENST00000535897 TARBP2Q15633 366 aaKnown RBP9.02□□□□□ -0.97
CHFR-211ENST00000535897 C15orf39Q6ZRI6 1047 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 KIAA2013Q8IYS2 634 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 RSAD2Q8WXG1 361 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 RIN2Q8WYP3 895 aaPredicted RBP9.02□□□□□ -0.97
CHFR-211ENST00000535897 BRF1Q92994 677 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 SLC26A6Q9BXS9 759 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 NIFKQ9BYG3 293 aaKnown RBP9.02□□□□□ -0.97
CHFR-211ENST00000535897 RSAD1Q9HA92 442 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 PIDD1Q9HB75 910 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 VPS54Q9P1Q0 977 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 DPP7Q9UHL4 492 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 FAN1Q9Y2M0 1017 aa9.02□□□□□ -0.97
CHFR-211ENST00000535897 PRG3Q9Y2Y8 225 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms