RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 A0A0U1RQF3 1178 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 RFXAPO00287 272 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 HOXA2O43364 376 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 PLA2G4BP0C869 781 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 GATMP50440 423 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 MBTD1Q05BQ5 628 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 KARSQ15046 597 aaKnown RBP24.58■■□□□ 1.53
VPS37C-202ENST00000535818 RINT1Q6NUQ1 792 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 KRI1Q8N9T8 703 aaKnown RBP24.58■■□□□ 1.53
VPS37C-202ENST00000535818 FBXO22Q8NEZ5 403 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 DEPTORQ8TB45 409 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 BSNDQ8WZ55 320 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 CLIC6Q96NY7 704 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 C2orf40Q9H1Z8 148 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 POLD4Q9HCU8 107 aa24.58■■□□□ 1.53
VPS37C-202ENST00000535818 MORC2Q9Y6X9 1032 aaPredicted RBP24.58■■□□□ 1.53
VPS37C-202ENST00000535818 EPOPA6NHQ4 379 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 TBKBP1A7MCY6 615 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 FGFR1P11362 822 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 SKIP12755 728 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 PLCG1P19174 1290 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 NAMPTP43490 491 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 RAB27AP51159 221 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 ABI1Q8IZP0 508 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 SYT2Q8N9I0 419 aaPredicted RBP24.57■■□□□ 1.52
VPS37C-202ENST00000535818 LINC00301Q8NCQ3 95 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 EPSTI1Q96J88 318 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 CCSER1Q9C0I3 900 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 CCDC39Q9UFE4 941 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 RWDD3Q9Y3V2 267 aa24.57■■□□□ 1.52
VPS37C-202ENST00000535818 SPTLC2O15270 562 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 TSPAN1O60635 241 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 HIP1RO75146 1068 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 YEATS4O95619 227 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 AXLP30530 894 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 CTNNB1P35222 781 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 C1orf186Q6ZWK4 172 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 TMEM192Q8IY95 271 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 GDPD5Q8WTR4 605 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 SYMPKQ92797 1274 aaKnown RBP24.56■■□□□ 1.52
VPS37C-202ENST00000535818 DRC1Q96MC2 740 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 TIPINQ9BVW5 301 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 FAM105AQ9NUU6 356 aa24.56■■□□□ 1.52
VPS37C-202ENST00000535818 COL4A4P53420 1690 aaPredicted RBP24.56■■□□□ 1.52
VPS37C-202ENST00000535818 NLRC5Q86WI3 1866 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 GTPBP6O43824 516 aaPredicted RBP24.55■■□□□ 1.52
VPS37C-202ENST00000535818 EOMESO95936 686 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 LIG1P18858 919 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 SLC12A3P55017 1021 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 RAD51AP2Q09MP3 1159 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 ADGRE1Q14246 886 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 DHX8Q14562 1220 aaKnown RBP24.55■■□□□ 1.52
VPS37C-202ENST00000535818 EPC2Q52LR7 807 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 SPOUT1Q5T280 376 aaKnown RBP24.55■■□□□ 1.52
VPS37C-202ENST00000535818 CDCA2Q69YH5 1023 aaPredicted RBP24.55■■□□□ 1.52
VPS37C-202ENST00000535818 NOTUMQ6P988 496 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 CPB2Q96IY4 423 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 TRAIPQ9BWF2 469 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 PRMT7Q9NVM4 692 aaPredicted RBP24.55■■□□□ 1.52
VPS37C-202ENST00000535818 MRPL42Q9Y6G3 142 aaKnown RBP24.55■■□□□ 1.52
VPS37C-202ENST00000535818 RALGAPA2Q2PPJ7 1873 aa24.55■■□□□ 1.52
VPS37C-202ENST00000535818 GUCY2CP25092 1073 aa24.54■■□□□ 1.52
VPS37C-202ENST00000535818 HOXA11P31270 313 aaPredicted RBP24.54■■□□□ 1.52
VPS37C-202ENST00000535818 TMEM132AQ24JP5 1023 aa24.54■■□□□ 1.52
VPS37C-202ENST00000535818 USP49Q70CQ1 688 aa24.54■■□□□ 1.52
VPS37C-202ENST00000535818 MAFAQ8NHW3 353 aaPredicted RBP24.54■■□□□ 1.52
VPS37C-202ENST00000535818 RAD54LQ92698 747 aa24.54■■□□□ 1.52
VPS37C-202ENST00000535818 TMEM117Q9H0C3 514 aa24.54■■□□□ 1.52
VPS37C-202ENST00000535818 KCND2Q9NZV8 630 aa24.54■■□□□ 1.52
VPS37C-202ENST00000535818 MYO9BQ13459 2157 aa24.54■■□□□ 1.52
VPS37C-202ENST00000535818 CCDC169A6NNP5 214 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 PPP6R2O75170 966 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 ATF7P17544 494 aaPredicted RBP24.53■■□□□ 1.52
VPS37C-202ENST00000535818 PEX3P56589 373 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 DMP1Q13316 513 aaPredicted RBP24.53■■□□□ 1.52
VPS37C-202ENST00000535818 MAPK6Q16659 721 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 AMHR2Q16671 573 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 LONRF3Q496Y0 759 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 ATL3Q6DD88 541 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 ZNF598Q86UK7 904 aaKnown RBP24.53■■□□□ 1.52
VPS37C-202ENST00000535818 GPBP1Q86WP2 473 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 MICALL1Q8N3F8 863 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 LARP4BQ92615 738 aaKnown RBP24.53■■□□□ 1.52
VPS37C-202ENST00000535818 CLP1Q92989 425 aaKnown RBP24.53■■□□□ 1.52
VPS37C-202ENST00000535818 PGBD4Q96DM1 585 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 CCDC51Q96ER9 411 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 PRIMPOLQ96LW4 560 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 KIFC3Q9BVG8 833 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 BLOC1S4Q9NUP1 217 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 CFAP45Q9UL16 551 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 PCDHB2Q9Y5E7 798 aa24.53■■□□□ 1.52
VPS37C-202ENST00000535818 FNDC1Q4ZHG4 1894 aaPredicted RBP24.53■■□□□ 1.52
VPS37C-202ENST00000535818 B4GALT5O43286 388 aa24.52■■□□□ 1.52
VPS37C-202ENST00000535818 BRD1O95696 1058 aa24.52■■□□□ 1.52
VPS37C-202ENST00000535818 PRKCBP05771 671 aa24.52■■□□□ 1.52
VPS37C-202ENST00000535818 ARF4P18085 180 aaPredicted RBP24.52■■□□□ 1.52
VPS37C-202ENST00000535818 MCM6Q14566 821 aa24.52■■□□□ 1.52
VPS37C-202ENST00000535818 RRAGBQ5VZM2 374 aa24.52■■□□□ 1.52
VPS37C-202ENST00000535818 PPP4R3CPQ6ZMV5 832 aa24.52■■□□□ 1.52
VPS37C-202ENST00000535818 DAW1Q8N136 415 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms