RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 GRIN2CQ14957 1233 aa25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 PCBP1Q15365 356 aaKnown RBP eCLIP25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 AMHR2Q16671 573 aa25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 ARSHQ5FYA8 562 aa25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 AXDND1Q5T1B0 1012 aaPredicted RBP25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 DACT1Q9NYF0 836 aa25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 KCND2Q9NZV8 630 aa25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 CCDC39Q9UFE4 941 aa25.15■■□□□ 1.62
SFSWAP-204ENST00000535399 LINC01553A4QN01 128 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 CUTAO60888 179 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 IBSPP21815 317 aaPredicted RBP25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 TXLNAP40222 546 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 PPP2R5AQ15172 486 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 SPRED2Q7Z698 418 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 ECHDC2Q86YB7 292 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 IFT74Q96LB3 600 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 GUCD1Q96NT3 240 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 TRAIPQ9BWF2 469 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 ELAC1Q9H777 363 aaKnown RBP25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 LRFN2Q9ULH4 789 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 PCDHB7Q9Y5E2 793 aa25.14■■□□□ 1.62
SFSWAP-204ENST00000535399 MYH15Q9Y2K3 1946 aa25.14■■□□□ 1.61
SFSWAP-204ENST00000535399 GBF1Q92538 1859 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 A0A087X0B3 334 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 NPHP3-ACAD11A0A0J9YXS1 232 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 A0A0U1RQF3 1178 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 TSPAN1O60635 241 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 NAALADL2Q58DX5 795 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 RRAGBQ5VZM2 374 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 SHC4Q6S5L8 630 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 GPBP1Q86WP2 473 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 DRC1Q96MC2 740 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 KIFC3Q9BVG8 833 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 C2orf40Q9H1Z8 148 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 TMEM161AQ9NX61 479 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 STK17AQ9UEE5 414 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 PCDHA7Q9UN72 937 aa25.13■■□□□ 1.61
SFSWAP-204ENST00000535399 ADGRA3Q8IWK6 1321 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 ERLIN2O94905 339 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 ATF7P17544 494 aaPredicted RBP25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 GATMP50440 423 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 NUCB2P80303 420 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 RAD51AP2Q09MP3 1159 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 DHX8Q14562 1220 aaKnown RBP25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 TWF2Q6IBS0 349 aaKnown RBP25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 PPP4R3CPQ6ZMV5 832 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 ZNF598Q86UK7 904 aaKnown RBP25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 ZBTB8OSQ8IWT0 167 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 DEPTORQ8TB45 409 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 LARP4BQ92615 738 aaKnown RBP25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 FZD8Q9H461 694 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 RNF19AQ9NV58 838 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 RNF216Q9NWF9 866 aaPredicted RBP25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 ATP6V1DQ9Y5K8 247 aa25.12■■□□□ 1.61
SFSWAP-204ENST00000535399 CHD7Q9P2D1 2997 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 COL4A6Q14031 1691 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 AXLP30530 894 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 NPTX2P47972 431 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 ME1P48163 572 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 PEX3P56589 373 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 KRT85P78386 507 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 UBXN11Q5T124 520 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 CCDC73Q6ZRK6 1079 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 LEO1Q8WVC0 666 aaPredicted RBP25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 CDX2Q99626 313 aaPredicted RBP25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 CCDC113Q9H0I3 377 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 C17orf75Q9HAS0 396 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 CDH23Q9H251 3354 aa25.11■■□□□ 1.61
SFSWAP-204ENST00000535399 SFI1A8K8P3 1242 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 B4GALT5O43286 388 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 NCLP19338 710 aaKnown RBP25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 ERVK-21P61565 698 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 FAM187BQ17R55 369 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 CMTR2Q8IYT2 770 aaKnown RBP25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 CPB2Q96IY4 423 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 PANK2Q9BZ23 570 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 CERS4Q9HA82 394 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 FAM105AQ9NUU6 356 aa25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 PRMT7Q9NVM4 692 aaPredicted RBP25.1■■□□□ 1.61
SFSWAP-204ENST00000535399 EPOPA6NHQ4 379 aa25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 ZNF623O75123 536 aa25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 LINC00271P0C7V0 271 aa25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 FGFR1P11362 822 aa25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 ARF4P18085 180 aaPredicted RBP25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 CACNB1Q02641 598 aaPredicted RBP25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 DMP1Q13316 513 aaPredicted RBP25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 CCDC51Q96ER9 411 aa25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 TGS1Q96RS0 853 aaKnown RBP25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 REEP2Q9BRK0 252 aa25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 PRDM12Q9H4Q4 367 aa25.09■■□□□ 1.61
SFSWAP-204ENST00000535399 CCDC169A6NNP5 214 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 EOMESO95936 686 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 SKIP12755 728 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 PLS3P13797 630 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 STAT6P42226 847 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 EFNA5P52803 228 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 NCBP1Q09161 790 aaKnown RBP25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 GIT2Q14161 759 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 BTG3Q14201 252 aaPredicted RBP25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 MAPK6Q16659 721 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms