RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ACO1P21399 889 aaKnown RBP7.11□□□□□ -1.27
PRKDC-205ENST00000535375 KIR2DL3P43628 341 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 MANFP55145 182 aaKnown RBP7.11□□□□□ -1.27
PRKDC-205ENST00000535375 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 DUSP8Q13202 625 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 PUM1Q14671 1186 aaKnown RBP eCLIP7.11□□□□□ -1.27
PRKDC-205ENST00000535375 LMBR1LQ6UX01 489 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 GAREM2Q75VX8 874 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 ADGRE4PQ86SQ3 457 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 SGMS1Q86VZ5 419 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 D2HGDHQ8N465 521 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 AFAP1L2Q8N4X5 818 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 ARL8AQ96BM9 186 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 AGO3Q9H9G7 860 aaKnown RBP7.11□□□□□ -1.27
PRKDC-205ENST00000535375 TOPORSQ9NS56 1045 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-205ENST00000535375 PPP2R3BQ9Y5P8 575 aa7.11□□□□□ -1.27
PRKDC-205ENST00000535375 A0A0A6YYK5 440 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-205ENST00000535375 VIL1P09327 827 aaKnown RBP7.1□□□□□ -1.27
PRKDC-205ENST00000535375 TMPRSS15P98073 1019 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 FAPQ12884 760 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 FOXL1Q12952 345 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 STAT4Q14765 748 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 CCDC178Q5BJE1 867 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 CLRN3Q8NCR9 226 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 ATL2Q8NHH9 583 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 SH3RF3Q8TEJ3 882 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-205ENST00000535375 EDAQ92838 391 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 GPHA2Q96T91 129 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 TCF25Q9BQ70 676 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 SOX7Q9BT81 388 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 JAG2Q9Y219 1238 aa7.1□□□□□ -1.27
PRKDC-205ENST00000535375 UBE2QL1A1L167 161 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 C1QTNF3-AMACRE9PGA6 284 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 GAAP10253 952 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 CD69Q07108 199 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 SAFB2Q14151 953 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRKDC-205ENST00000535375 UGT8Q16880 541 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 CT83Q5H943 113 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 RNF187Q5TA31 235 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-205ENST00000535375 GLB1L2Q8IW92 636 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 UNC5BQ8IZJ1 945 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 OR14C36Q8NHC7 312 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 ACAP3Q96P50 834 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 MPHOSPH9Q99550 1183 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 SPC25Q9HBM1 224 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 IL23AQ9NPF7 189 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 PRSS50Q9UI38 385 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 TESMINQ9Y4I5 508 aa7.09□□□□□ -1.27
PRKDC-205ENST00000535375 DNAJC6O75061 913 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 HIBADHP31937 336 aaKnown RBP7.08□□□□□ -1.28
PRKDC-205ENST00000535375 NPEPPSP55786 919 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 MGAT5Q09328 741 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 FAM111BQ6SJ93 734 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 GGNQ86UU5 652 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 CMTM4Q8IZR5 234 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 PPP1R14CQ8TAE6 165 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 WDR66Q8TBY9 1149 aa7.08□□□□□ -1.28
PRKDC-205ENST00000535375 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.08□□□□□ -1.28
PRKDC-205ENST00000535375 GOLGA8AA7E2F4 631 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 CAPN14A8MX76 684 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 NRP1O14786 923 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 CYP27B1O15528 508 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 ALDH1A2O94788 518 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 LY86O95711 162 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 LPLP06858 475 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 PDCD1Q15116 288 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 CDSNQ15517 529 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 FSCN1Q16658 493 aaKnown RBP7.07□□□□□ -1.28
PRKDC-205ENST00000535375 PITRM1Q5JRX3 1037 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 SPDYAQ5MJ70 313 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 MAMDC4Q6UXC1 1216 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 Q6ZSN1 163 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 ZNF808Q8N4W9 903 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-205ENST00000535375 EAF2Q96CJ1 260 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-205ENST00000535375 KCTD10Q9H3F6 313 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 TLR9Q9NR96 1032 aa7.07□□□□□ -1.28
PRKDC-205ENST00000535375 MTSS1O43312 755 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 SEC24DO94855 1032 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-205ENST00000535375 LGALS4P56470 323 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 SCAND1P57086 179 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 SPIDRQ14159 915 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 R3HDM1Q15032 1099 aaKnown RBP7.06□□□□□ -1.28
PRKDC-205ENST00000535375 RNF219Q5W0B1 726 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-205ENST00000535375 SPRED1Q7Z699 444 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 SPATS2Q86XZ4 545 aaKnown RBP7.06□□□□□ -1.28
PRKDC-205ENST00000535375 GSPT2Q8IYD1 628 aaKnown RBP7.06□□□□□ -1.28
PRKDC-205ENST00000535375 THEMISQ8N1K5 641 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-205ENST00000535375 ANKRD35Q8N283 1001 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 RAX2Q96IS3 184 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 EPC1Q9H2F5 836 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 ING3Q9NXR8 418 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 MCM8Q9UJA3 840 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 TMPRSS11EQ9UL52 423 aa7.06□□□□□ -1.28
PRKDC-205ENST00000535375 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.06□□□□□ -1.28
PRKDC-205ENST00000535375 GPR39O43194 453 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 EYA4O95677 639 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 ENPP1P22413 925 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 ADAM8P78325 824 aa7.05□□□□□ -1.28
PRKDC-205ENST00000535375 TRIM25Q14258 630 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms