RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SPON2Q9BUD6 331 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 TEX12Q9BXU0 123 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 APOBEC2Q9Y235 224 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 A0A0G2JND7 137 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 A8MXQ7 604 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 E2F6O75461 281 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 STAT3P40763 770 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 KCNA1Q09470 495 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 KNOP1Q1ED39 458 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 KLHL38Q2WGJ6 581 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 ITPRIPL1Q6GPH6 555 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 MAGI2Q86UL8 1455 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 FRMD3A2A2Y4 597 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 PYGLP06737 847 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 KCNH2Q12809 1159 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 SLC44A5Q8NCS7 719 aa19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 PPARGC1AQ9UBK2 798 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-203ENST00000535236 ADGBQ8N7X0 1667 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 TRIM49BA6NDI0 452 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 ASB14A6NK59 587 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 GOLGA8MH3BSY2 632 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 NMT2O60551 498 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 ATP1A3P13637 1013 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 EEF1DP29692 281 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 E2F5Q15329 346 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 TAF11Q15544 211 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 EGFL8Q99944 293 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 PITPNM3Q9BZ71 974 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 DCP1AQ9NPI6 582 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 ORC2Q13416 577 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 ZNF579Q8NAF0 562 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 RNF25Q96BH1 459 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 NUP85Q9BW27 656 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 FAM96AQ9H5X1 160 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 DYRK4Q9NR20 520 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 IP6K2Q9UHH9 426 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 ERVK-7P63135 1459 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 LGALS16A8MUM7 142 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 FDX1P10109 184 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 MDM2Q00987 491 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 CAV1Q03135 178 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 EMBQ6PCB8 327 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 YAF2Q8IY57 180 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 ZNF564Q8TBZ8 553 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 PLAAQ9Y263 795 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 LRRC53A6NM62 1247 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 DCTN3O75935 186 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 SKIP12755 728 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 PEX19P40855 299 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 AP1B1Q10567 949 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 CELF1Q92879 486 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 INTS2Q9H0H0 1204 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 SEL1LQ9UBV2 794 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 KCNH4Q9UQ05 1017 aa19.34■□□□□ 0.69
SFSWAP-203ENST00000535236 F5H6K3 240 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 CTIFO43310 598 aaKnown RBP19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 KLRC3Q07444 240 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 BRINP3Q76B58 766 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 CYB5R4Q7L1T6 521 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 CD2BP2O95400 341 aaKnown RBP19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 RALAP11233 206 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 POU5F1BQ06416 359 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 GRAMD1BQ3KR37 738 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 BTBD8Q5XKL5 378 aa19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 ACTR5Q9H9F9 607 aaPredicted RBP19.33■□□□□ 0.69
SFSWAP-203ENST00000535236 KRT7P08729 469 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 ZNF560Q96MR9 790 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 LXNQ9BS40 222 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 MAP3K20Q9NYL2 800 aaKnown RBP19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 SCOCQ9UIL1 159 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 FAM95CA0A1B0GW59 222 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 RASA4BC9J798 803 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 RASA4O43374 803 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 ENAHQ8N8S7 591 aaPredicted RBP19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 TRIM62Q9BVG3 475 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 POLD4Q9HCU8 107 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 QRICH1Q2TAL8 776 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 TAS2R42Q7RTR8 314 aa19.33■□□□□ 0.68
SFSWAP-203ENST00000535236 F5H423 210 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 NCAPD2Q15021 1401 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 KYAT1Q16773 422 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 ACBD5Q5T8D3 534 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 RASSF3Q86WH2 238 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 KIF12Q96FN5 646 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 SLC7A5P2Q9GIP4 190 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 POTEFA5A3E0 1075 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 POTEIP0CG38 1075 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 PRAMEP78395 509 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 CASP8Q14790 479 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 TMEM259Q4ZIN3 620 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 CC2D1AQ6P1N0 951 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 POTEGQ6S5H5 508 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 POTEEQ6S8J3 1075 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 CDKL3Q8IVW4 592 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 CCNYL1Q8N7R7 359 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 HIPK4Q8NE63 616 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 PBXIP1Q96AQ6 731 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 SAAL1Q96ER3 474 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms