RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 HOXB8P17481 243 aaPredicted RBP11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 DRP2Q13474 957 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 KCNC3Q14003 757 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 XKR3Q5GH77 459 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 CWF19L1Q69YN2 538 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 NEK8Q86SG6 692 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 TNFRSF25Q93038 417 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 MAP7D2Q96T17 732 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 CWH43Q9H720 699 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 TMEM161AQ9NX61 479 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 VAV3Q9UKW4 847 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 AKT3Q9Y243 479 aa11.31□□□□□ -0.6
CLSTN3-203ENST00000534830 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 CCDC194A0A1B0GVG4 234 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 TBKBP1A7MCY6 615 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 TBX3O15119 743 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 SEC24BO95487 1268 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 DARSP14868 501 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 GCFC2P16383 781 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 XBP1P17861 261 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 AOC1P19801 751 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 PSMC5P62195 406 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 TBC1D8BQ0IIM8 1120 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 ANO5Q75V66 913 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 DTWD2Q8NBA8 298 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 NECTIN4Q96NY8 510 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 CASD1Q96PB1 797 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 TCF25Q9BQ70 676 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 SEMA4AQ9H3S1 761 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 ORC3Q9UBD5 711 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 CEP250Q9BV73 2442 aa11.3□□□□□ -0.6
CLSTN3-203ENST00000534830 KMT2BQ9UMN6 2715 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 ACACBO00763 2458 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 FSCN2O14926 492 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 MAFO75444 373 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 SPIRE1Q08AE8 756 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 MTERF2Q49AM1 385 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 LRRC55Q6ZSA7 311 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 ZNF598Q86UK7 904 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 ECHDC2Q86YB7 292 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 WASF1Q92558 559 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 CASP10Q92851 521 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 SH2D3AQ9BRG2 576 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 ADAM7Q9H2U9 754 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 TYW1Q9NV66 732 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 WRAP73Q9P2S5 460 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 HCSTQ9UBK5 93 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 PUF60Q9UHX1 559 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 R4GN57 208 aa11.29□□□□□ -0.6
CLSTN3-203ENST00000534830 SPTBN2O15020 2390 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 A0A0U1RQF3 1178 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 HIDE1A8MVS5 230 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 STK25O00506 426 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 EOMESO95936 686 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 FGFR1P11362 822 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 ZSCAN20P17040 1043 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 FGFR4P22455 802 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 MTHFRP42898 656 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 QARSP47897 775 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 ITIH3Q06033 890 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 NR5A1Q13285 461 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 EPHA7Q15375 998 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 ZNF410Q86VK4 478 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 C4orf19Q8IY42 314 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 ZNF668Q96K58 619 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 RTP3Q9BQQ7 232 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 TMEM117Q9H0C3 514 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 CHST12Q9NRB3 414 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 DLL3Q9NYJ7 618 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 FBXL21Q9UKT6 434 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 PPME1Q9Y570 386 aa11.28□□□□□ -0.6
CLSTN3-203ENST00000534830 FRYLO94915 3013 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 A0A087WZ62 844 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 HOXA2O43364 376 aa11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 EIF5BO60841 1220 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-203ENST00000534830 CSDE1O75534 798 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms