RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 LARGE1O95461 756 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 BMP15O95972 392 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 NR5A1Q13285 461 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 NOMO2Q5JPE7 1267 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 NOTUMQ6P988 496 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 DDX53Q86TM3 631 aaKnown RBP11.57□□□□□ -0.56
CSDE1-217ENST00000534699 NOSTRINQ8IVI9 506 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 THNSL1Q8IYQ7 743 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 KCNN1Q92952 543 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 ZBTB10Q96DT7 871 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 DPP7Q9UHL4 492 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 GINS2Q9Y248 185 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 GIT1Q9Y2X7 761 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 MBTPS2O43462 519 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 RARRES1P49788 294 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 CREMQ03060 361 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 SPRED2Q7Z698 418 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 PRPF31Q8WWY3 499 aaKnown RBP11.56□□□□□ -0.56
CSDE1-217ENST00000534699 NECTIN4Q96NY8 510 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
CSDE1-217ENST00000534699 PRMT7Q9NVM4 692 aaPredicted RBP11.56□□□□□ -0.56
CSDE1-217ENST00000534699 ERLIN2O94905 339 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 CAMK1Q14012 370 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 CBX2Q14781 532 aaPredicted RBP11.56□□□□□ -0.56
CSDE1-217ENST00000534699 TTC38Q5R3I4 469 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 TWF2Q6IBS0 349 aaKnown RBP11.56□□□□□ -0.56
CSDE1-217ENST00000534699 TLE6Q9H808 572 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 C17orf75Q9HAS0 396 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
CSDE1-217ENST00000534699 PAPLNO95428 1278 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
CSDE1-217ENST00000534699 KCNA5P22460 613 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 ABCD1P33897 745 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 ALDH7A1P49419 539 aaKnown RBP11.55□□□□□ -0.56
CSDE1-217ENST00000534699 KCNQ1P51787 676 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 ST3GAL1Q11201 340 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 KCNC3Q14003 757 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 RILPL1Q5EBL4 403 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 FAM102BQ5T8I3 360 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 CDCA2Q69YH5 1023 aaPredicted RBP11.55□□□□□ -0.56
CSDE1-217ENST00000534699 TPH2Q8IWU9 490 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 KIF2CQ99661 725 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 CSRNP2Q9H175 543 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 N4BP3O15049 544 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 OFD1O75665 1012 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 LTBRP36941 435 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 EFNA5P52803 228 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 TFF2Q03403 129 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 GNL2Q13823 731 aaKnown RBP11.55□□□□□ -0.56
CSDE1-217ENST00000534699 EARS2Q5JPH6 523 aaKnown RBP11.55□□□□□ -0.56
CSDE1-217ENST00000534699 CLLU1OSQ5K130 101 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 ZBTB8OSQ8IWT0 167 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 GJD3Q8N144 294 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 KIFAP3Q92845 792 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 KCND2Q9NZV8 630 aa11.55□□□□□ -0.56
CSDE1-217ENST00000534699 PIN4Q9Y237 131 aaKnown RBP11.55□□□□□ -0.56
CSDE1-217ENST00000534699 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
CSDE1-217ENST00000534699 JAK2O60674 1132 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 NR1I2O75469 434 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 CYP11B2P19099 503 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 ITIH3Q06033 890 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 PAN2Q504Q3 1202 aaKnown RBP11.54□□□□□ -0.56
CSDE1-217ENST00000534699 ARL6IP4Q66PJ3 421 aaKnown RBP11.54□□□□□ -0.56
CSDE1-217ENST00000534699 RTL10Q7L3V2 364 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 CCDC83Q8IWF9 413 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 TMEM169Q96HH4 297 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 PCDHB2Q9Y5E7 798 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 MORC2Q9Y6X9 1032 aaPredicted RBP11.54□□□□□ -0.56
CSDE1-217ENST00000534699 CTSAP10619 480 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 TXKP42681 527 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 NAMPTP43490 491 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 NPEPPSP55786 919 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 ZP2Q05996 745 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 PLA2G4FQ68DD2 849 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 LRRC55Q6ZSA7 311 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 SMRP1Q8NCR6 262 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 RSAD1Q9HA92 442 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 XPNPEP1Q9NQW7 623 aa11.54□□□□□ -0.56
CSDE1-217ENST00000534699 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
CSDE1-217ENST00000534699 TDRD15B5MCY1 1934 aaKnown RBP11.54□□□□□ -0.56
CSDE1-217ENST00000534699 ITGA4P13612 1032 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 MTHFRP42898 656 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 NUBP1P53384 320 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 BCAR1P56945 870 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 CTTNQ14247 550 aaKnown RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 HYIQ5T013 277 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 PDXDC1Q6P996 788 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 MRPL43Q8N983 215 aaKnown RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 SUSD6Q92537 303 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 HERC2P3Q9BVR0 1158 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 ALG13Q9NP73 1137 aaKnown RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 RGL1Q9NZL6 768 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 WRAP73Q9P2S5 460 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 PPFIA3O75145 1194 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 FGFR1P11362 822 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 NDUFV1P49821 464 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms