RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 TPRNQ4KMQ1 711 aa26.72■■□□□ 1.87
SIPA1-210ENST00000534406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.72■■□□□ 1.87
SIPA1-210ENST00000534406 TNMDQ9H2S6 317 aa26.72■■□□□ 1.87
SIPA1-210ENST00000534406 HPSEQ9Y251 543 aa26.72■■□□□ 1.87
SIPA1-210ENST00000534406 FAM237AA0A1B0GTK4 181 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 CCDC169A6NNP5 214 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 MGEA5O60502 916 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 PLS3P13797 630 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 NPTX2P47972 431 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 GIT2Q14161 759 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 MYOCDQ8IZQ8 938 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 PHOSPHO2Q8TCD6 241 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 ADAM2Q99965 735 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 KIFC3Q9BVG8 833 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 C1orf112Q9NSG2 853 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 AGPAT5Q9NUQ2 364 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 LARSQ9P2J5 1176 aaKnown RBP26.71■■□□□ 1.87
SIPA1-210ENST00000534406 PIN4Q9Y237 131 aaKnown RBP26.71■■□□□ 1.87
SIPA1-210ENST00000534406 TTC3P53804 2025 aa26.71■■□□□ 1.87
SIPA1-210ENST00000534406 ADGRA3Q8IWK6 1321 aa26.7■■□□□ 1.87
SIPA1-210ENST00000534406 MYMKA6NI61 221 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 SFI1A8K8P3 1242 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 ZSCAN20P17040 1043 aaPredicted RBP26.7■■□□□ 1.86
SIPA1-210ENST00000534406 ZNF131P52739 623 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 EFNA5P52803 228 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 DSC3Q14574 896 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 DYMQ7RTS9 669 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 DDX12PQ92771 950 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 LRRC27Q9C0I9 530 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 PARVGQ9HBI0 331 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 KMT5AQ9NQR1 393 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 KBTBD4Q9NVX7 518 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 KCNG1Q9UIX4 513 aa26.7■■□□□ 1.86
SIPA1-210ENST00000534406 ENPP3O14638 875 aa26.69■■□□□ 1.86
SIPA1-210ENST00000534406 SYKP43405 635 aa26.69■■□□□ 1.86
SIPA1-210ENST00000534406 NDUFA8P51970 172 aa26.69■■□□□ 1.86
SIPA1-210ENST00000534406 HABP4Q5JVS0 413 aaKnown RBP26.69■■□□□ 1.86
SIPA1-210ENST00000534406 FAM109BQ6ICB4 259 aaPredicted RBP26.69■■□□□ 1.86
SIPA1-210ENST00000534406 CEP57L1Q8IYX8 460 aa26.69■■□□□ 1.86
SIPA1-210ENST00000534406 SPIRE2Q8WWL2 714 aa26.69■■□□□ 1.86
SIPA1-210ENST00000534406 ZHX3Q9H4I2 956 aa26.69■■□□□ 1.86
SIPA1-210ENST00000534406 PRMT7Q9NVM4 692 aaPredicted RBP26.69■■□□□ 1.86
SIPA1-210ENST00000534406 USP25Q9UHP3 1055 aa26.69■■□□□ 1.86
SIPA1-210ENST00000534406 PHLPP2Q6ZVD8 1323 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 GBF1Q92538 1859 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.68■■□□□ 1.86
SIPA1-210ENST00000534406 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.68■■□□□ 1.86
SIPA1-210ENST00000534406 TSPAN1O60635 241 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 AMPD3Q01432 767 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 MAPK6Q16659 721 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 PPP4R3CPQ6ZMV5 832 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 RTN4RL1Q86UN2 441 aaPredicted RBP26.68■■□□□ 1.86
SIPA1-210ENST00000534406 HERC6Q8IVU3 1022 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 CCDC113Q9H0I3 377 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 GOLPH3LQ9H4A5 285 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 CHST12Q9NRB3 414 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 RGS18Q9NS28 235 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 DACT1Q9NYF0 836 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 ARHGAP28Q9P2N2 729 aa26.68■■□□□ 1.86
SIPA1-210ENST00000534406 ACTN4O43707 911 aaKnown RBP26.67■■□□□ 1.86
SIPA1-210ENST00000534406 PRKCBP05771 671 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 SLFN14P0C7P3 912 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 SMTNP53814 917 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 SMAD3P84022 425 aaKnown RBP26.67■■□□□ 1.86
SIPA1-210ENST00000534406 NCBP1Q09161 790 aaKnown RBP26.67■■□□□ 1.86
SIPA1-210ENST00000534406 AMHR2Q16671 573 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 TWF2Q6IBS0 349 aaKnown RBP26.67■■□□□ 1.86
SIPA1-210ENST00000534406 MYCT1Q8N699 235 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 TMEM87AQ8NBN3 555 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 STAMQ92783 540 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 DNAJC19Q96DA6 116 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 PRIMPOLQ96LW4 560 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 SERTAD1Q9UHV2 236 aa26.67■■□□□ 1.86
SIPA1-210ENST00000534406 SLC16A4O15374 487 aa26.66■■□□□ 1.86
SIPA1-210ENST00000534406 AXLP30530 894 aa26.66■■□□□ 1.86
SIPA1-210ENST00000534406 SARSP49591 514 aaKnown RBP26.66■■□□□ 1.86
SIPA1-210ENST00000534406 FAM187BQ17R55 369 aa26.66■■□□□ 1.86
SIPA1-210ENST00000534406 SLC24A5Q71RS6 500 aa26.66■■□□□ 1.86
SIPA1-210ENST00000534406 FZD8Q9H461 694 aa26.66■■□□□ 1.86
SIPA1-210ENST00000534406 CNTNAP2Q9UHC6 1331 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 GRXCR1A8MXD5 290 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 C9IYK1 514 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 H0YCG3 227 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 GJB5O95377 273 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 GAP43P17677 238 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 LIG1P18858 919 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 NOTUMQ6P988 496 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 TMCO2Q7Z6W1 182 aaPredicted RBP26.65■■□□□ 1.86
SIPA1-210ENST00000534406 NPAS4Q8IUM7 802 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 TOP1MTQ969P6 601 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 CCDC51Q96ER9 411 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 NTPCRQ9BSD7 190 aaKnown RBP26.65■■□□□ 1.86
SIPA1-210ENST00000534406 ZBED2Q9BTP6 218 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 TRIM9Q9C026 710 aa26.65■■□□□ 1.86
SIPA1-210ENST00000534406 RNF216Q9NWF9 866 aaPredicted RBP26.65■■□□□ 1.86
SIPA1-210ENST00000534406 K7ENM7 598 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 B4GALT5O43286 388 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 UPP2O95045 317 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 IDEP14735 1019 aa26.64■■□□□ 1.86
SIPA1-210ENST00000534406 IBSPP21815 317 aaPredicted RBP26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms