RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ATF7P17544 494 aaPredicted RBP17.22■□□□□ 0.35
CPSF1-211ENST00000533492 ALDH7A1P49419 539 aaKnown RBP17.22■□□□□ 0.35
CPSF1-211ENST00000533492 RAB27AP51159 221 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 ERVFC1P60507 584 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 LONRF3Q496Y0 759 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 RNF149Q8NC42 400 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 PGBD4Q96DM1 585 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 MTMR9Q96QG7 549 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 ENTPD7Q9NQZ7 604 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 ANKEF1Q9NU02 776 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 FAM105AQ9NUU6 356 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 PRKAG3Q9UGI9 489 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 FSD2A1L4K1 749 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 PER2O15055 1255 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 MBTPS2O43462 519 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 LYPLA2O95372 231 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 PBX3P40426 434 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.35
CPSF1-211ENST00000533492 MXD4Q14582 209 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-211ENST00000533492 PLPP4Q5VZY2 271 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 GLB1LQ6UWU2 654 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 TMC7Q7Z402 723 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 RSPH1Q8WYR4 309 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 LPPQ93052 612 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 CDCA3Q99618 268 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-211ENST00000533492 TCF25Q9BQ70 676 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 FOXP1Q9H334 677 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-211ENST00000533492 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
CPSF1-211ENST00000533492 AGPAT5Q9NUQ2 364 aa17.21■□□□□ 0.35
CPSF1-211ENST00000533492 ZNF623O75123 536 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 DGAT1O75907 488 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 COL9A1P20849 921 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
CPSF1-211ENST00000533492 RNASELQ05823 741 aaKnown RBP17.2■□□□□ 0.34
CPSF1-211ENST00000533492 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
CPSF1-211ENST00000533492 TFDP1Q14186 410 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
CPSF1-211ENST00000533492 ZNF174Q15697 407 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 SMAD2Q15796 467 aaKnown RBP17.2■□□□□ 0.34
CPSF1-211ENST00000533492 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 KIF2CQ99661 725 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 MINDY3Q9H8M7 445 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 INPP5FQ9Y2H2 1132 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
CPSF1-211ENST00000533492 CARNS1A5YM72 827 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 POTEMA6NI47 508 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 FSCN2O14926 492 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 ZC3H11AO75152 810 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPSF1-211ENST00000533492 ERLIN2O94905 339 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 XRCC6P12956 609 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPSF1-211ENST00000533492 TECP42680 631 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 BCAR1P56945 870 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 DUSP6Q16828 381 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 NOMO2Q5JPE7 1267 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 ADHFE1Q8IWW8 467 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 PIGOQ8TEQ8 1089 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPSF1-211ENST00000533492 TMEM169Q96HH4 297 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 POP1Q99575 1024 aaKnown RBP17.19■□□□□ 0.34
CPSF1-211ENST00000533492 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 CLEC1BQ9P126 229 aa17.19■□□□□ 0.34
CPSF1-211ENST00000533492 BARX2Q9UMQ3 279 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-211ENST00000533492 A0A087WWV3 80 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 NT5C1B-RDH14C9J2C7 533 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 PI4K2BG5E9Z4 385 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 OFD1O75665 1012 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 SRGAP2BP0DMP2 458 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 CA8P35219 290 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 RARRES1P49788 294 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 PTENP60484 403 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 ZP2Q05996 745 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 ORC2Q13416 577 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-211ENST00000533492 PCBP1Q15365 356 aaKnown RBP eCLIP17.18■□□□□ 0.34
CPSF1-211ENST00000533492 ERMNQ8TAM6 284 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 URGCPQ8TCY9 931 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 MSLNLQ96KJ4 702 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 TUFT1Q9NNX1 390 aa17.18■□□□□ 0.34
CPSF1-211ENST00000533492 NOL7Q9UMY1 257 aaKnown RBP17.18■□□□□ 0.34
CPSF1-211ENST00000533492 MEIS3P2A8K0S8 358 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 INO80B-WBP1J3KQ70 363 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 ST18O60284 1047 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 EYA4O95677 639 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 GLP2RO95838 553 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 OR52Z1P0C646 297 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 ALADP13716 330 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 AXLP30530 894 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 HOXA11P31270 313 aaPredicted RBP17.17■□□□□ 0.34
CPSF1-211ENST00000533492 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 COASYQ13057 564 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 TMEM31Q5JXX7 168 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 TTC38Q5R3I4 469 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 NOSTRINQ8IVI9 506 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 CNNM3Q8NE01 707 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 FAM193BQ96PV7 902 aaPredicted RBP17.17■□□□□ 0.34
CPSF1-211ENST00000533492 NACC1Q96RE7 527 aa17.17■□□□□ 0.34
CPSF1-211ENST00000533492 GBP3Q9H0R5 595 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms