RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 H0YCG3 227 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 K7ERI5 159 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 TRAK2O60296 914 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 NR1I2O75469 434 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 SCP2P22307 547 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 BMP8BP34820 402 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 EPHB4P54760 987 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 ASIC1P78348 528 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 HERC4Q5GLZ8 1057 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 TMEM240Q5SV17 173 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 CNNM4Q6P4Q7 775 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZNF365Q70YC5 407 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 CATSPER4Q7RTX7 472 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 FAM228AQ86W67 206 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 FAM178BQ8IXR5 827 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 SLC17A8Q8NDX2 589 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 VWCEQ96DN2 955 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 FTHL17Q9BXU8 183 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 BLZF1Q9H2G9 400 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 ERVK-5Q9HDB9 667 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 LMBRD1Q9NUN5 540 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 SEL1LQ9UBV2 794 aa12.4□□□□□ -0.42
TRAPPC4-211ENST00000533012 PHLPP2Q6ZVD8 1323 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 WDR81Q562E7 1941 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 PVALEFA0A1B0GWK0 134 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 SLC16A4O15374 487 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 GTPBP6O43824 516 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 EFCAB14O75071 495 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 ERLIN2O94905 339 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 MAPTP10636 758 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 FGFR4P22455 802 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 ABCD1P33897 745 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 MBTD1Q05BQ5 628 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 CUL4BQ13620 913 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 MAPK6Q16659 721 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 CDCA2Q69YH5 1023 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 GRAMD1CQ8IYS0 662 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■■□□□ 14
TRAPPC4-211ENST00000533012 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 TMEM134Q9H6X4 195 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 MINDY3Q9H8M7 445 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 CHST12Q9NRB3 414 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 PRMT7Q9NVM4 692 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 ALPK3Q96L96 1907 aa12.39□□□□□ -0.43
TRAPPC4-211ENST00000533012 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 FRMD3A2A2Y4 597 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 DENND3A2RUS2 1198 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 ENPP3O14638 875 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 PTMSP20962 102 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 CASP1P29466 404 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 AXLP30530 894 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 STRN3Q13033 797 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 POSTNQ15063 836 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 UNC13DQ70J99 1090 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 HAUS6Q7Z4H7 955 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 SFR1Q86XK3 245 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 ELOA2Q8IYF1 753 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 TMEM161BQ8NDZ6 487 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 HERVK_113Q902F9 699 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 PRIMPOLQ96LW4 560 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 KIFC3Q9BVG8 833 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 FZD8Q9H461 694 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 MRPL44Q9H9J2 332 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 DACT1Q9NYF0 836 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 ARHGAP28Q9P2N2 729 aa12.38□□□□□ -0.43
TRAPPC4-211ENST00000533012 TCHHQ07283 1943 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 ZBBXA8MT70 800 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 ACKR2O00590 384 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 PRKCBP05771 671 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 NCKAP1LP55160 1127 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 COASYQ13057 564 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 PRPF4BQ13523 1007 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 SHHQ15465 462 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 TMEM132AQ24JP5 1023 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 ZNF720Q7Z2F6 126 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 ADAM2Q99965 735 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 RGS18Q9NS28 235 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 TBC1D7Q9P0N9 293 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 PIN4Q9Y237 131 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
TRAPPC4-211ENST00000533012 K7ENM7 598 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 TSPAN1O60635 241 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 SMC2O95347 1197 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 GCNT3O95395 438 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 AMHP03971 560 aa12.36□□□□□ -0.43
TRAPPC4-211ENST00000533012 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms