RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 SLC9A7Q96T83 725 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 ADAM2Q99965 735 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 NFKBIZQ9BYH8 718 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 TSPYL2Q9H2G4 693 aaPredicted RBP27.44■■□□□ 1.98
USP48-214ENST00000532737 INO80B-WBP1J3KQ70 363 aa27.43■■□□□ 1.98
USP48-214ENST00000532737 AMHP03971 560 aa27.43■■□□□ 1.98
USP48-214ENST00000532737 PEX3P56589 373 aa27.43■■□□□ 1.98
USP48-214ENST00000532737 ZNF697Q5TEC3 545 aa27.43■■□□□ 1.98
USP48-214ENST00000532737 CDCA2Q69YH5 1023 aaPredicted RBP27.43■■□□□ 1.98
USP48-214ENST00000532737 FAM43BQ6ZT52 329 aaPredicted RBP27.43■■□□□ 1.98
USP48-214ENST00000532737 DEPTORQ8TB45 409 aa27.43■■□□□ 1.98
USP48-214ENST00000532737 KIFC3Q9BVG8 833 aa27.43■■□□□ 1.98
USP48-214ENST00000532737 ADGRA3Q8IWK6 1321 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 A0A1W2PQ27 194 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 A0A1W2PQ64 194 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 A0A1W2PQD8 194 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 MYMKA6NI61 221 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 KRT18P05783 430 aaKnown RBP27.42■■□□□ 1.98
USP48-214ENST00000532737 PFKFB1P16118 471 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 NPTX2P47972 431 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 HERC6Q8IVU3 1022 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 MYOCDQ8IZQ8 938 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 RGS18Q9NS28 235 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 ODF2LQ9ULJ1 636 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 HPSEQ9Y251 543 aa27.42■■□□□ 1.98
USP48-214ENST00000532737 FAM237AA0A1B0GTK4 181 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 DENND3A2RUS2 1198 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 PLS3P13797 630 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 SMAD3P84022 425 aaKnown RBP27.41■■□□□ 1.98
USP48-214ENST00000532737 AMHR2Q16671 573 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 DYMQ7RTS9 669 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 ZBTB8OSQ8IWT0 167 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 STAMQ92783 540 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 CUEDC2Q9H467 287 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 C17orf75Q9HAS0 396 aa27.41■■□□□ 1.98
USP48-214ENST00000532737 MICAL3Q7RTP6 2002 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 CCDC169A6NNP5 214 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 RABGGTBP53611 331 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 DMP1Q13316 513 aaPredicted RBP27.4■■□□□ 1.98
USP48-214ENST00000532737 FAM117BQ6P1L5 589 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 FSIP1Q8NA03 581 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 DDX12PQ92771 950 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 C2orf40Q9H1Z8 148 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 CHST12Q9NRB3 414 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 AGPAT5Q9NUQ2 364 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 KBTBD4Q9NVX7 518 aa27.4■■□□□ 1.98
USP48-214ENST00000532737 PIN4Q9Y237 131 aaKnown RBP27.4■■□□□ 1.98
USP48-214ENST00000532737 C9IYK1 514 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 TSPAN1O60635 241 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 ZSCAN20P17040 1043 aaPredicted RBP27.39■■□□□ 1.98
USP48-214ENST00000532737 HOXA11P31270 313 aaPredicted RBP27.39■■□□□ 1.98
USP48-214ENST00000532737 PBX2P40425 430 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 NDUFA8P51970 172 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 ZNF131P52739 623 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 SPIRE2Q8WWL2 714 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 TOP1MTQ969P6 601 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 DNAJC19Q96DA6 116 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 NTPCRQ9BSD7 190 aaKnown RBP27.39■■□□□ 1.98
USP48-214ENST00000532737 CCDC113Q9H0I3 377 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 FZD8Q9H461 694 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 GOLPH3LQ9H4A5 285 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 CDH23Q9H251 3354 aa27.39■■□□□ 1.98
USP48-214ENST00000532737 B4GALT5O43286 388 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 ERLIN2O94905 339 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 FAM13AO94988 1023 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 UPP2O95045 317 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 FAM189BP81408 668 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 PCBP1Q15365 356 aaKnown RBP eCLIP27.38■■□□□ 1.97
USP48-214ENST00000532737 SLC24A5Q71RS6 500 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 CRIPAKQ8N1N5 446 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 MRPS27Q92552 414 aaKnown RBP27.38■■□□□ 1.97
USP48-214ENST00000532737 PYM1Q9BRP8 204 aaKnown RBP27.38■■□□□ 1.97
USP48-214ENST00000532737 TNMDQ9H2S6 317 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 SEMA6BQ9H3T3 888 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 ZHX3Q9H4I2 956 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 KMT5AQ9NQR1 393 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 C1orf112Q9NSG2 853 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 SERTAD1Q9UHV2 236 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 PRUNE2Q8WUY3 3088 aa27.38■■□□□ 1.97
USP48-214ENST00000532737 SLC16A4O15374 487 aa27.37■■□□□ 1.97
USP48-214ENST00000532737 TBCAO75347 108 aaKnown RBP27.37■■□□□ 1.97
USP48-214ENST00000532737 GJB5O95377 273 aa27.37■■□□□ 1.97
USP48-214ENST00000532737 SARSP49591 514 aaKnown RBP27.37■■□□□ 1.97
USP48-214ENST00000532737 PPP4R3CPQ6ZMV5 832 aa27.37■■□□□ 1.97
USP48-214ENST00000532737 MYCT1Q8N699 235 aa27.37■■□□□ 1.97
USP48-214ENST00000532737 CDX2Q99626 313 aaPredicted RBP27.37■■□□□ 1.97
USP48-214ENST00000532737 PBX4Q9BYU1 374 aa27.37■■□□□ 1.97
USP48-214ENST00000532737 TTYH1Q9H313 450 aaPredicted RBP27.37■■□□□ 1.97
USP48-214ENST00000532737 PARVGQ9HBI0 331 aa27.37■■□□□ 1.97
USP48-214ENST00000532737 PRMT7Q9NVM4 692 aaPredicted RBP27.37■■□□□ 1.97
USP48-214ENST00000532737 LARSQ9P2J5 1176 aaKnown RBP27.37■■□□□ 1.97
USP48-214ENST00000532737 ARHGAP28Q9P2N2 729 aa27.37■■□□□ 1.97
USP48-214ENST00000532737 TTLL13PA6NNM8 815 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 ACTN4O43707 911 aaKnown RBP27.36■■□□□ 1.97
USP48-214ENST00000532737 MYOGP15173 224 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 LIG1P18858 919 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 IBSPP21815 317 aaPredicted RBP27.36■■□□□ 1.97
USP48-214ENST00000532737 EFNA5P52803 228 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 FAM187BQ17R55 369 aa27.36■■□□□ 1.97
USP48-214ENST00000532737 LONRF3Q496Y0 759 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms