RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 CPA5Q8WXQ8 436 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 KAT5Q92993 513 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 ARHGEF26Q96DR7 871 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 NPHS2Q9NP85 383 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 GINM1Q9NU53 330 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 FOXN3O00409 490 aaPredicted RBP11.6□□□□□ -0.55
CHEK1-213ENST00000532449 SLC16A4O15374 487 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 PLS3P13797 630 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 SPRED3Q2MJR0 410 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 C6orf163Q5TEZ5 329 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 CCDC33Q8N5R6 958 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 SIK3Q9Y2K2 1263 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 GOLGA4Q13439 2230 aaKnown RBP11.6□□□□□ -0.55
CHEK1-213ENST00000532449 PVALEFA0A1B0GWK0 134 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 GJB6O95452 261 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 BASP1P80723 227 aaKnown RBP11.6□□□□□ -0.55
CHEK1-213ENST00000532449 FUT2Q10981 343 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 ARMC3Q5W041 872 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 LLGL2Q6P1M3 1020 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 SCYL2Q6P3W7 929 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 FAM196AQ6ZSG2 479 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 MIER3Q7Z3K6 550 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 PALM2Q8IXS6 379 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 OSBPL7Q9BZF2 842 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 C10orf88Q9H8K7 445 aa11.6□□□□□ -0.55
CHEK1-213ENST00000532449 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHEK1-213ENST00000532449 CCDC188H7C350 402 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 HNRNPDLO14979 420 aaKnown RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 RASSF2P50749 326 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 MEA1Q16626 185 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 CCDC62Q6P9F0 684 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 GBP5Q96PP8 586 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 PARVGQ9HBI0 331 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 MAD1L1Q9Y6D9 718 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 SMTNP53814 917 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 GALNT17Q6IS24 598 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 PPP1R36Q96LQ0 422 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 UBXN6Q9BZV1 441 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 INTS2Q9H0H0 1204 aaKnown RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 GRIN2DO15399 1336 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 SSU72P8A0A1W2PR75 194 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 CLGNO14967 610 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 ORC4O43929 436 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 MYL1P05976 194 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 UBTFL6P0CB48 400 aaPredicted RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 EIF2AK2P19525 551 aaKnown RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 PON1P27169 355 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 EPHB1P54762 984 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 NPY5RQ15761 445 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 CCDC89Q8N998 374 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 ZNF564Q8TBZ8 553 aaPredicted RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 DHX38Q92620 1227 aaKnown RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 ZNF577Q9BSK1 485 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 ZWILCHQ9H900 591 aa11.59□□□□□ -0.55
CHEK1-213ENST00000532449 METTL14Q9HCE5 456 aaKnown RBP11.59□□□□□ -0.55
CHEK1-213ENST00000532449 SYNJ2BP-COX16A0A087WUM0 186 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 GH2P01242 217 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 IL9RQ01113 521 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 ITGB3BPQ13352 177 aaPredicted RBP11.58□□□□□ -0.56
CHEK1-213ENST00000532449 RASA3Q14644 834 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 C6orf118Q5T5N4 469 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 EPM2AIP1Q7L775 607 aaPredicted RBP11.58□□□□□ -0.56
CHEK1-213ENST00000532449 SPATA21Q7Z572 469 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 AGAP11Q8TF27 550 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 ERP44Q9BS26 406 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 CYP4F11Q9HBI6 524 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 COX16Q9P0S2 106 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 TTLL3Q9Y4R7 772 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 KAT6AQ92794 2004 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 F8VZ95 297 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 ZCCHC18P0CG32 403 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 CYP11B2P19099 503 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 MAN1A1P33908 653 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 CATSPER3Q86XQ3 398 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 BAP1Q92560 729 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 TRIM4Q9C037 500 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 MAGEF1Q9HAY2 307 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 ERVV-1B6SEH8 477 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 GH1P01241 217 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 NSFP46459 744 aaKnown RBP11.58□□□□□ -0.56
CHEK1-213ENST00000532449 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
CHEK1-213ENST00000532449 BFSP1Q12934 665 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 WDR44Q5JSH3 913 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 PALB2Q86YC2 1186 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 RFFLQ8WZ73 363 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 AMNQ9BXJ7 453 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 CNOT10Q9H9A5 744 aaKnown RBP11.58□□□□□ -0.56
CHEK1-213ENST00000532449 UBN1Q9NPG3 1134 aa11.58□□□□□ -0.56
CHEK1-213ENST00000532449 BZW2Q9Y6E2 419 aaKnown RBP11.58□□□□□ -0.56
CHEK1-213ENST00000532449 NTSR2O95665 410 aa11.57□□□□□ -0.56
CHEK1-213ENST00000532449 ATP5DP30049 168 aa11.57□□□□□ -0.56
CHEK1-213ENST00000532449 PSMC4P43686 418 aa11.57□□□□□ -0.56
CHEK1-213ENST00000532449 SEZ6Q53EL9 994 aa11.57□□□□□ -0.56
CHEK1-213ENST00000532449 RINT1Q6NUQ1 792 aa11.57□□□□□ -0.56
CHEK1-213ENST00000532449 ERICH1Q86X53 443 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms