RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 BECN1Q14457 450 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 FOXD4L6Q3SYB3 417 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 UBXN11Q5T124 520 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 FOXD4L3Q6VB84 417 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 CATSPER4Q7RTX7 472 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 ECHDC2Q86YB7 292 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 KRI1Q8N9T8 703 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 FZD8Q9H461 694 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 TMEM161AQ9NX61 479 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 RCOR1Q9UKL0 485 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 NLRC5Q86WI3 1866 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 MYH11P35749 1972 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 ADGRA3Q8IWK6 1321 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 COL6A3P12111 3177 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 A0A087X0B3 334 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 TTLL13PA6NNM8 815 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 RFXAPO00287 272 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 TSPAN1O60635 241 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 LPXNO60711 386 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 ZNF623O75123 536 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 EDN1P05305 212 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 ZSCAN20P17040 1043 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 DNM1Q05193 864 aaKnown RBP15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 STK38Q15208 465 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 ATL3Q6DD88 541 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 MYLIPQ8WY64 445 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 YME1L1Q96TA2 773 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 CCDC113Q9H0I3 377 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 PRDM12Q9H4Q4 367 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 CERS4Q9HA82 394 aa15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-220ENST00000532375 KIAA1671Q9BY89 1806 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 HIP1RO75146 1068 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 STAG3L1P0CL83 205 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 NAMPTP43490 491 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 MCM6Q14566 821 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 PCBP1Q15365 356 aaKnown RBP eCLIP15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 FAM187BQ17R55 369 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 RAD54LQ92698 747 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 KIFAP3Q92845 792 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 CLP1Q92989 425 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 CALML4Q96GE6 196 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 CDK5RAP3Q96JB5 506 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 NTPCRQ9BSD7 190 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 C17orf80Q9BSJ5 609 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 DACT1Q9NYF0 836 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 PIN4Q9Y237 131 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 PCDHB7Q9Y5E2 793 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 RALGAPA2Q2PPJ7 1873 aa15.43■□□□□ 0.06
TSPAN4-220ENST00000532375 PRRC2BQ5JSZ5 2229 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 NPHP3-ACAD11A0A0J9YXS1 232 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 LRRIQ4A6NIV6 560 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 MEIS3P2A8K0S8 358 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 SFI1A8K8P3 1242 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 INO80B-WBP1J3KQ70 363 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 B4GALT5O43286 388 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 EOMESO95936 686 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 FGFR1P11362 822 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 ARF4P18085 180 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 POU3F3P20264 500 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 NPTX2P47972 431 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 CLLU1OSQ5K130 101 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 SHC4Q6S5L8 630 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 TAS1R3Q7RTX0 852 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 MRPL10Q7Z7H8 261 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 CMTR2Q8IYT2 770 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 CASD1Q96PB1 797 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 TGS1Q96RS0 853 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 KIFC3Q9BVG8 833 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 FAM105AQ9NUU6 356 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 KCND2Q9NZV8 630 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 PCDHA7Q9UN72 937 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 STXBP5LQ9Y2K9 1186 aa15.42■□□□□ 0.06
TSPAN4-220ENST00000532375 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 CUTAO60888 179 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 SSBP05455 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 AXLP30530 894 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 RAD51AP2Q09MP3 1159 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 TWF2Q6IBS0 349 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 LRRC55Q6ZSA7 311 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 FIBCD1Q8N539 461 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 SMG8Q8ND04 991 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 CPB2Q96IY4 423 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 TIPINQ9BVW5 301 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 ARHGAP28Q9P2N2 729 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 USP20Q9Y2K6 914 aa15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 MRPL42Q9Y6G3 142 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-220ENST00000532375 EYSQ5T1H1 3165 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 C5orf67F2Z3F1 127 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 ZNF131P52739 623 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 PEX3P56589 373 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 GIT2Q14161 759 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 BTG3Q14201 252 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 PPP2R5AQ15172 486 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 E2F4Q16254 413 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 EPC2Q52LR7 807 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 NT5DC1Q5TFE4 455 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms