RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 MUTYHQ9UIF7 546 aa17.07■□□□□ 0.32
DEPDC7-204ENST00000532078 PIEZO1Q92508 2521 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 FGFR4P22455 802 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 KRT17Q04695 432 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 DRP2Q13474 957 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 INF2Q27J81 1249 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 CLLU1OSQ5K130 101 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 LRRC55Q6ZSA7 311 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 ZNF410Q86VK4 478 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 RSPH1Q8WYR4 309 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 TCF25Q9BQ70 676 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 JPH2Q9BR39 696 aaPredicted RBP17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 CHST12Q9NRB3 414 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 SPG21Q9NZD8 308 aa17.06■□□□□ 0.32
DEPDC7-204ENST00000532078 STK36Q9NRP7 1315 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 IGKV6-21A0A0C4DH24 114 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 CCDC194A0A1B0GVG4 234 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 TMEM150BA6NC51 233 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 STBD1O95210 358 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 GCFC2P16383 781 aaKnown RBP17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 XBP1P17861 261 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 PSMC5P62195 406 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 LETM2Q2VYF4 491 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 ZNF598Q86UK7 904 aaKnown RBP17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 HELQQ8TDG4 1101 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 CEP89Q96ST8 783 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 KCNK17Q96T54 332 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 PHF7Q9BWX1 381 aaPredicted RBP17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 ADAM33Q9BZ11 813 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 INO80BQ9C086 356 aaPredicted RBP17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
DEPDC7-204ENST00000532078 A0A087WZ62 844 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 LOC730098B7Z3J9 87 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 SLC37A4O43826 429 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 MAFO75444 373 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 CSDE1O75534 798 aaKnown RBP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 ATF7P17544 494 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 PBX3P40426 434 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 PPP2R5CQ13362 524 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 NEK8Q86SG6 692 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 FAM20AQ96MK3 541 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 SH2D3AQ9BRG2 576 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 FDXACB1Q9BRP7 624 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 TRAIPQ9BWF2 469 aa17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 SUCLA2Q9P2R7 463 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-204ENST00000532078 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 SKIP12755 728 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 PHKA2P46019 1235 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 QARSP47897 775 aaKnown RBP17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 SCRN1Q12765 414 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 SMC1AQ14683 1233 aaKnown RBP17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 CBX2Q14781 532 aaPredicted RBP17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 TWF2Q6IBS0 349 aaKnown RBP17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 PPP4R3AQ6IN85 833 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 TMEM184AQ6ZMB5 413 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 ANO5Q75V66 913 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 TMC7Q7Z402 723 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 RHPN2Q8IUC4 686 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 SLC39A11Q8N1S5 342 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 SLC7A3Q8WY07 619 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 SUSD6Q92537 303 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 NAP1L4Q99733 375 aaKnown RBP17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 KCNH6Q9H252 994 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 KCNMB3Q9NPA1 279 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 VAV3Q9UKW4 847 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 PIN4Q9Y237 131 aaKnown RBP17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 PPME1Q9Y570 386 aa17.03■□□□□ 0.32
DEPDC7-204ENST00000532078 HIDE1A8MVS5 230 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 TECP42680 631 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 ALDH7A1P49419 539 aaKnown RBP17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 RAB27AP51159 221 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 KCNC3Q14003 757 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 NBR1Q14596 966 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 PLA2G4FQ68DD2 849 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 ANKRD54Q6NXT1 300 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 HFE2Q6ZVN8 426 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 CATSPER4Q7RTX7 472 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 EXOC8Q8IYI6 725 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 EDAQ92838 391 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 MFSD14AQ96MC6 490 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 NLRP4Q96MN2 994 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.32
DEPDC7-204ENST00000532078 EML1O00423 815 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 TBX3O15119 743 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 CCNT1O60563 726 aaKnown RBP17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 PFKFB2O60825 505 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 NEFLP07196 543 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 HOXB8P17481 243 aaPredicted RBP17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 POLGP54098 1239 aaPredicted RBP17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 BCAR1P56945 870 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 BMS1Q14692 1282 aaKnown RBP17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 LLGL2Q6P1M3 1020 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms