RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	UHRF1	Q96T88	793 aa	Predicted RBP	7.02	□□□□□ -1.29
PUM1-222	ENST00000531867	GPR160	Q9UJ42	338 aa		7.02	□□□□□ -1.29
PUM1-222	ENST00000531867	ZNF214	Q9UL59	606 aa	Predicted RBP	7.02	□□□□□ -1.29
PUM1-222	ENST00000531867	COL4A3BP	Q9Y5P4	624 aa		7.02	□□□□□ -1.29
PUM1-222	ENST00000531867	RFX7	Q2KHR2	1363 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	MEIS1	O00470	390 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	SHOX	O15266	292 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	PLIN1	O60240	522 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	CYP2B6	P20813	491 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	NASP	P49321	788 aa	Predicted RBP	7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	RTP1	P59025	263 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	MRPS5	P82675	430 aa	Known RBP	7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	SLC14A2	Q15849	920 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	ZYX	Q15942	572 aa	Known RBP	7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	TAF7L	Q5H9L4	462 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	EPHA10	Q5JZY3	1008 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	G2E3	Q7L622	706 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	CCDC146	Q8IYE0	955 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	TSPYL6	Q8N831	410 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	CPLX3	Q8WVH0	158 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	SOCS4	Q8WXH5	440 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	DIRC2	Q96SL1	478 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	IDI2	Q9BXS1	227 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	SENP6	Q9GZR1	1112 aa	Predicted RBP	7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	TMX1	Q9H3N1	280 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	THEG	Q9P2T0	379 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	TNFRSF10D	Q9UBN6	386 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	YBX2	Q9Y2T7	364 aa	Known RBP	7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	KIF16B	Q96L93	1317 aa		7.01	□□□□□ -1.29
PUM1-222	ENST00000531867	PIEZO1	Q92508	2521 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	TRIM75P	A6NK02	468 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	DNM1L	O00429	736 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	NRDC	O43847	1150 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	TSPAN15	O95858	294 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	ITGA4	P13612	1032 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	CTSK	P43235	329 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	TCP10	Q12799	353 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	CHAF1A	Q13111	956 aa	Predicted RBP	7	□□□□□ -1.29
PUM1-222	ENST00000531867	CCDC57	Q2TAC2	916 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	TIGD5	Q53EQ6	642 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7	□□□□□ -1.29
PUM1-222	ENST00000531867	CRTC3	Q6UUV7	619 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	LMBR1L	Q6UX01	489 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	CEP128	Q6ZU80	1094 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	VGLL2	Q8N8G2	317 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	DNAAF4	Q8WXU2	420 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	LPAR1	Q92633	364 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	BAD	Q92934	168 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	LRFN3	Q9BTN0	628 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	PCGF6	Q9BYE7	350 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	PUS3	Q9BZE2	481 aa	Known RBP	7	□□□□□ -1.29
PUM1-222	ENST00000531867	GP6	Q9HCN6	339 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	CNNM1	Q9NRU3	951 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	EBF1	Q9UH73	591 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	FHOD1	Q9Y613	1164 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	MROH5	Q6ZUA9	1318 aa		7	□□□□□ -1.29
PUM1-222	ENST00000531867	TCF20	Q9UGU0	1960 aa	Known RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	TRIM43B	A6NCK2	446 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	MSC	O60682	206 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	ENTPD3	O75355	529 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	VAV1	P15498	845 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	ZKSCAN1	P17029	563 aa	Predicted RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	CD247	P20963	164 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	HOXA7	P31268	230 aa	Predicted RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	CALD1	Q05682	793 aa	Known RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	CCL14	Q16627	93 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	SLC39A5	Q6ZMH5	540 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	CKAP2L	Q8IYA6	745 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	INTS4	Q96HW7	963 aa	Known RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	CCDC136	Q96JN2	1154 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	CDADC1	Q9BWV3	514 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	GBP3	Q9H0R5	595 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	PDLIM7	Q9NR12	457 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	SF3B6	Q9Y3B4	125 aa	Known RBP	6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	MYH13	Q9UKX3	1938 aa		6.99	□□□□□ -1.29
PUM1-222	ENST00000531867	MYO9B	Q13459	2157 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	DDTL	A6NHG4	134 aa	Predicted RBP	6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	ENPP3	O14638	875 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	PSPN	O60542	156 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	DNAJC6	O75061	913 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	PARN	O95453	639 aa	Known RBP	6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	TP53	P04637	393 aa	Predicted RBP	6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	ITGB8	P26012	769 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	MAPK4	P31152	587 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	RGS2	P41220	211 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	EPHB4	P54760	987 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	CAVIN4	Q5BKX8	364 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	BEND3	Q5T5X7	828 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	FILIP1	Q7Z7B0	1213 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	NLRX1	Q86UT6	975 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	KRTAP1-3	Q8IUG1	177 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	GPRC5A	Q8NFJ5	357 aa		6.98	□□□□□ -1.29
PUM1-222	ENST00000531867	WDR66	Q8TBY9	1149 aa		6.98	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms