RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 SSBP05455 408 aaKnown RBP eCLIP21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 NAMPTP43490 491 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 DNM1Q05193 864 aaKnown RBP21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 MBTD1Q05BQ5 628 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 GRIN2CQ14957 1233 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 CDCA2Q69YH5 1023 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 ZNF689Q96CS4 500 aaPredicted RBP21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 TIPINQ9BVW5 301 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 TRAIPQ9BWF2 469 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 TMEM161AQ9NX61 479 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 KCND2Q9NZV8 630 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 CCDC39Q9UFE4 941 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 CFAP45Q9UL16 551 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 PCDHB7Q9Y5E2 793 aa21.05■□□□□ 0.96
PACSIN3-208ENST00000531226 HIP1RO75146 1068 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 ERLIN2O94905 339 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 IBSPP21815 317 aaPredicted RBP21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 GUCY2CP25092 1073 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 TWF2Q6IBS0 349 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 ECHDC2Q86YB7 292 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 ZBTB8OSQ8IWT0 167 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 DAW1Q8N136 415 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 KCNG4Q8TDN1 519 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 RAD54LQ92698 747 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 IFT74Q96LB3 600 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 DRC1Q96MC2 740 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 POLD4Q9HCU8 107 aa21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 TDRD15B5MCY1 1934 aaKnown RBP21.04■□□□□ 0.96
PACSIN3-208ENST00000531226 CHD9Q3L8U1 2897 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 A0A0U1RQF3 1178 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 TSPAN1O60635 241 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 MAPK7Q13164 816 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 SPRED2Q7Z698 418 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 CMTR2Q8IYT2 770 aaKnown RBP21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 LARP4BQ92615 738 aaKnown RBP21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 CDX2Q99626 313 aaPredicted RBP21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 C2orf40Q9H1Z8 148 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 STK17AQ9UEE5 414 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 ATG2AQ2TAZ0 1938 aa21.03■□□□□ 0.96
PACSIN3-208ENST00000531226 CUTAO60888 179 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 AXLP30530 894 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 HOXA11P31270 313 aaPredicted RBP21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 ERVK-21P61565 698 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 MCM6Q14566 821 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 AMHR2Q16671 573 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 PPP4R3CPQ6ZMV5 832 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 DEPTORQ8TB45 409 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 TGS1Q96RS0 853 aaKnown RBP21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 PRDM12Q9H4Q4 367 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 CERS4Q9HA82 394 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 C17orf75Q9HAS0 396 aa21.02■□□□□ 0.96
PACSIN3-208ENST00000531226 SKIP12755 728 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 ATF7P17544 494 aaPredicted RBP21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 GATMP50440 423 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 RAB27AP51159 221 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 BTG3Q14201 252 aaPredicted RBP21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 FAM187BQ17R55 369 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 RRAGBQ5VZM2 374 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 ZNF598Q86UK7 904 aaKnown RBP21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 GPBP1Q86WP2 473 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 FIBCD1Q8N539 461 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 MYLIPQ8WY64 445 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 PRIMPOLQ96LW4 560 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 FAM105AQ9NUU6 356 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 PRMT7Q9NVM4 692 aaPredicted RBP21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 ATP6V1DQ9Y5K8 247 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 PLXNA4Q9HCM2 1894 aa21.01■□□□□ 0.95
PACSIN3-208ENST00000531226 CHD7Q9P2D1 2997 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 TRIP11Q15643 1979 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 HOXA2O43364 376 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 EOMESO95936 686 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 FGFR1P11362 822 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 ARF4P18085 180 aaPredicted RBP21■□□□□ 0.95
PACSIN3-208ENST00000531226 DDIT3P35638 169 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 PEX3P56589 373 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 KRT85P78386 507 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 NCBP1Q09161 790 aaKnown RBP21■□□□□ 0.95
PACSIN3-208ENST00000531226 RAD51AP2Q09MP3 1159 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 DMP1Q13316 513 aaPredicted RBP21■□□□□ 0.95
PACSIN3-208ENST00000531226 DHX8Q14562 1220 aaKnown RBP21■□□□□ 0.95
PACSIN3-208ENST00000531226 NAALADL2Q58DX5 795 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 ARSHQ5FYA8 562 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 AXDND1Q5T1B0 1012 aaPredicted RBP21■□□□□ 0.95
PACSIN3-208ENST00000531226 NOTUMQ6P988 496 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 CCDC73Q6ZRK6 1079 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 ARNTL2Q8WYA1 636 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 CCDC51Q96ER9 411 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 SAMD11Q96NU1 681 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 KIFC3Q9BVG8 833 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 CCDC113Q9H0I3 377 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 FZD8Q9H461 694 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 RNF19AQ9NV58 838 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 RCOR1Q9UKL0 485 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 ODF2LQ9ULJ1 636 aa21■□□□□ 0.95
PACSIN3-208ENST00000531226 EPOPA6NHQ4 379 aa20.99■□□□□ 0.95
PACSIN3-208ENST00000531226 ZNF623O75123 536 aa20.99■□□□□ 0.95
PACSIN3-208ENST00000531226 LINC00271P0C7V0 271 aa20.99■□□□□ 0.95
PACSIN3-208ENST00000531226 NPTX2P47972 431 aa20.99■□□□□ 0.95
PACSIN3-208ENST00000531226 ME1P48163 572 aa20.99■□□□□ 0.95
PACSIN3-208ENST00000531226 NUCB2P80303 420 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 251.6 ms