RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 NCKAP1LP55160 1127 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 MRPS9P82933 396 aaKnown RBP10.24□□□□□ -0.77
IFT46-208ENST00000531201 GTF2BQ00403 316 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 KRT76Q01546 638 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 MTMR1Q13613 665 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 RASA3Q14644 834 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 COG2Q14746 738 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 DRAP1Q14919 205 aaPredicted RBP10.24□□□□□ -0.77
IFT46-208ENST00000531201 CLUL1Q15846 466 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 ZSCAN26Q16670 478 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 CBWD6Q4V339 395 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 CBWD3Q5JTY5 395 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 CBWD5Q5RIA9 395 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 LEKR1Q6ZMV7 388 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 MIGA2Q7L4E1 593 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 IL31RAQ8NI17 732 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 U2AF1L4Q8WU68 220 aaKnown RBP10.24□□□□□ -0.77
IFT46-208ENST00000531201 MS4A14Q96JA4 679 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 SENP7Q9BQF6 1050 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 SMARCAL1Q9NZC9 954 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 CWC15Q9P013 229 aaKnown RBP10.24□□□□□ -0.77
IFT46-208ENST00000531201 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.24□□□□□ -0.77
IFT46-208ENST00000531201 TTC7AQ9ULT0 858 aaPredicted RBP10.24□□□□□ -0.77
IFT46-208ENST00000531201 WDR81Q562E7 1941 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 PFASO15067 1338 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 ASTN2O75129 1339 aaPredicted RBP10.24□□□□□ -0.77
IFT46-208ENST00000531201 RLFQ13129 1914 aa10.24□□□□□ -0.77
IFT46-208ENST00000531201 WDR64B1ANS9 1081 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 KCNK3O14649 394 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 SHOX2O60902 331 aaPredicted RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 CAPN2P17655 700 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 GGCXP38435 758 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
IFT46-208ENST00000531201 VAMP7P51809 220 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 OAZ1P54368 228 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 GALCP54803 685 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 GYS2P54840 703 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 PSMC5P62195 406 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 SLC7A5Q01650 507 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 PPFIA1Q13136 1202 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 CUL1Q13616 776 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 ENOX2Q16206 610 aaKnown RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 PPP2R5EQ16537 467 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 NBPF9Q3BBW0 867 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 EPC2Q52LR7 807 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 GJB7Q6PEY0 223 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 PEX26Q7Z412 305 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 NT5DC3Q86UY8 548 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 C1orf131Q8NDD1 294 aaKnown RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 LMO3Q8TAP4 145 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 HES6Q96HZ4 224 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.77
IFT46-208ENST00000531201 IKZF4Q9H2S9 585 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 SLITRK6Q9H5Y7 841 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 TCEAL9Q9UHQ7 104 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 DKC1O60832 514 aaKnown RBP eCLIP10.23□□□□□ -0.77
IFT46-208ENST00000531201 HSF2BPO75031 334 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 ZBED4O75132 1171 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 GLI1P08151 1106 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 TRIM49P0CI25 452 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 TRIM49CP0CI26 452 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 PYGBP11216 843 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 ALAS1P13196 640 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 VCAM1P19320 739 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 YWHABP31946 246 aaKnown RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 ABCD1P33897 745 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 HNRNPH2P55795 449 aaKnown RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 TGFB2P61812 414 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 PPATQ06203 517 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 PGM5Q15124 567 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 ZNF746Q6NUN9 644 aaPredicted RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 KSR1Q8IVT5 923 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 CD302Q8IX05 232 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 FAM76AQ8TAV0 307 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 GPRASP2Q96D09 838 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 CCDC43Q96MW1 224 aaKnown RBP10.23□□□□□ -0.77
IFT46-208ENST00000531201 KRT12Q99456 494 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 PDCD2LQ9BRP1 358 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 ISCUQ9H1K1 167 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 TAOK3Q9H2K8 898 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 C17orf75Q9HAS0 396 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 POLD4Q9HCU8 107 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 PXMP2Q9NR77 195 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 EXOC7Q9UPT5 735 aa10.23□□□□□ -0.77
IFT46-208ENST00000531201 COL11A1P12107 1806 aaPredicted RBP10.22□□□□□ -0.77
IFT46-208ENST00000531201 SIP14410 1827 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 ANKRD62A6NC57 917 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 GOLGA6CA6NDK9 693 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 A6NNZ2 444 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 DDX39AO00148 427 aaKnown RBP10.22□□□□□ -0.77
IFT46-208ENST00000531201 MAFGO15525 162 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 CEP104O60308 925 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 MTA2O94776 668 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 GOLGA6DP0CG33 693 aa10.22□□□□□ -0.77
IFT46-208ENST00000531201 HSPA9P38646 679 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms