RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 PRIMPOLQ96LW4 560 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 CBWD1Q9BRT8 395 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 KIFC3Q9BVG8 833 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 NUCKS1Q9H1E3 243 aaKnown RBP11.94□□□□□ -0.5
SRPRA-205ENST00000531104 SMARCAD1Q9H4L7 1026 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 AZI2Q9H6S1 392 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 SIX2Q9NPC8 291 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 FAM207AQ9NSI2 230 aaPredicted RBP11.94□□□□□ -0.5
SRPRA-205ENST00000531104 HSPBP1Q9NZL4 362 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 USP20Q9Y2K6 914 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 REXO2Q9Y3B8 237 aaKnown RBP11.94□□□□□ -0.5
SRPRA-205ENST00000531104 EPN1Q9Y6I3 576 aaPredicted RBP11.94□□□□□ -0.5
SRPRA-205ENST00000531104 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
SRPRA-205ENST00000531104 NOP56O00567 594 aaKnown RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 EXOC3O60645 756 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 NDUFA10O95299 355 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 GARTP22102 1010 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 FMO5P49326 533 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 BRDTQ58F21 947 aaPredicted RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 DNTTIP2Q5QJE6 756 aaKnown RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 C1orf220Q5T0J3 134 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 KLHDC7AQ5VTJ3 777 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 IER5Q5VY09 327 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 GBP6Q6ZN66 633 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 INTS8Q75QN2 995 aaKnown RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 DPP9Q86TI2 863 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 PPTC7Q8NI37 304 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 TMEM143Q96AN5 459 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 HHIPL1Q96JK4 782 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 TINF2Q9BSI4 451 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 DESI2Q9BSY9 194 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 ZNHIT6Q9NWK9 470 aaKnown RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 AIPL1Q9NZN9 384 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 CPA4Q9UI42 421 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 MYO6Q9UM54 1294 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
SRPRA-205ENST00000531104 DAAM1Q9Y4D1 1078 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 PAXBP1Q9Y5B6 917 aa11.93□□□□□ -0.5
SRPRA-205ENST00000531104 LRRC53A6NM62 1247 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 EIF3CLB5ME19 914 aaKnown RBP11.92□□□□□ -0.5
SRPRA-205ENST00000531104 P4HA2O15460 535 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 HBP1O60381 514 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 TLR2O60603 784 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 LCA5LO95447 670 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 SLC9A1P19634 815 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 CNGA1P29973 690 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 ARHGAP25P42331 645 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 TM4SF4P48230 202 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 ETF1P62495 437 aaKnown RBP11.92□□□□□ -0.5
SRPRA-205ENST00000531104 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
SRPRA-205ENST00000531104 EXOC3L4Q17RC7 722 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 ASTE1Q2TB18 679 aaPredicted RBP11.92□□□□□ -0.5
SRPRA-205ENST00000531104 DUSP28Q4G0W2 176 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 DCAF17Q5H9S7 520 aaPredicted RBP11.92□□□□□ -0.5
SRPRA-205ENST00000531104 HGSNATQ68CP4 663 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 IQSEC1Q6DN90 963 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 TRIM50Q86XT4 487 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 LMO3Q8TAP4 145 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 PLEKHO2Q8TD55 490 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 GLG1Q92896 1179 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 CCDC102AQ96A19 550 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 MFSD14AQ96MC6 490 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 EIF3CQ99613 913 aaKnown RBP11.92□□□□□ -0.5
SRPRA-205ENST00000531104 CRACR2AQ9BSW2 395 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 ABHD16BQ9H3Z7 469 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 PCIF1Q9H4Z3 704 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 NHEJ1Q9H9Q4 299 aaPredicted RBP11.92□□□□□ -0.5
SRPRA-205ENST00000531104 SLC5A4Q9NY91 659 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 ARHGAP20Q9P2F6 1191 aa11.92□□□□□ -0.5
SRPRA-205ENST00000531104 PHLPP2Q6ZVD8 1323 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.91□□□□□ -0.5
SRPRA-205ENST00000531104 SSU72P8A0A1W2PR75 194 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 KIF3CO14782 793 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 KIAA0391O15091 583 aaKnown RBP11.91□□□□□ -0.5
SRPRA-205ENST00000531104 ADCY3O60266 1144 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 LGALS2P05162 132 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 ADRB2P07550 413 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 ACTN1P12814 892 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 UCHL3P15374 230 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 SMPD1P17405 629 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 VAMP7P51809 220 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 JAM2P57087 298 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 POLR2FP61218 127 aaKnown RBP11.91□□□□□ -0.5
SRPRA-205ENST00000531104 APBA1Q02410 837 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 ACVR2BQ13705 512 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 CAPSQ13938 189 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 CBWD6Q4V339 395 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 CBWD3Q5JTY5 395 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 ZNF484Q5JVG2 852 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 CBWD5Q5RIA9 395 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 TCERG1LQ5VWI1 586 aa11.91□□□□□ -0.5
SRPRA-205ENST00000531104 CDCA2Q69YH5 1023 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms