RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 DEPTORQ8TB45 409 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 KCNN1Q92952 543 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 FIZ1Q96SL8 496 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 OSBPL7Q9BZF2 842 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 ARHGAP28Q9P2N2 729 aa18.68■□□□□ 0.58
SF3B2-211ENST00000531041 H0YCG3 227 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 NBNO60934 754 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 RPN1P04843 607 aaKnown RBP18.67■□□□□ 0.58
SF3B2-211ENST00000531041 SYN1P17600 705 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 EFNA5P52803 228 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 TSHZ1Q6ZSZ6 1077 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 CLSTN2Q9H4D0 955 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 ST6GALNAC4Q9H4F1 302 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 MINDY3Q9H8M7 445 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 ZMYND8Q9ULU4 1186 aaPredicted RBP18.67■□□□□ 0.58
SF3B2-211ENST00000531041 NOC2LQ9Y3T9 749 aaKnown RBP18.67■□□□□ 0.58
SF3B2-211ENST00000531041 PDE4DIPQ5VU43 2346 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 PHLPP2Q6ZVD8 1323 aa18.67■□□□□ 0.58
SF3B2-211ENST00000531041 SLC16A4O15374 487 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 RPS6KA5O75582 802 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 CXCL10P02778 98 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 GHRP10912 638 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 MBTD1Q05BQ5 628 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 KCNB1Q14721 858 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 PCBP1Q15365 356 aaKnown RBP eCLIP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 KMT5BQ4FZB7 885 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 TMEM161BQ8NDZ6 487 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 BADQ92934 168 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 CCDC47Q96A33 483 aaKnown RBP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 GSDMAQ96QA5 445 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 KIFC3Q9BVG8 833 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 TMEM134Q9H6X4 195 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 AGO3Q9H9G7 860 aaKnown RBP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 PCDHA5Q9Y5H7 936 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 K7ERI5 159 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 CSDE1O75534 798 aaKnown RBP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 SMC2O95347 1197 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 CSF2RAP15509 400 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 ABCD1P33897 745 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 SARSP49591 514 aaKnown RBP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 PSMD2Q13200 908 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 CAMK4Q16566 473 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 FAM187BQ17R55 369 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 PLEKHG4Q58EX7 1191 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 FAM43BQ6ZT52 329 aaPredicted RBP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 ZNF720Q7Z2F6 126 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 HAUS6Q7Z4H7 955 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 FAM228AQ86W67 206 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 RPUSD2Q8IZ73 545 aaKnown RBP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 VWCEQ96DN2 955 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 CCDC113Q9H0I3 377 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 NUP62CLQ9H1M0 184 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 FZD8Q9H461 694 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 MRPL44Q9H9J2 332 aaKnown RBP18.66■□□□□ 0.58
SF3B2-211ENST00000531041 EXOC1Q9NV70 894 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 PADI3Q9ULW8 664 aa18.66■□□□□ 0.58
SF3B2-211ENST00000531041 INO80B-WBP1J3KQ70 363 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 GPR182O15218 404 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 RHOBTB3O94955 611 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 SFPQP23246 707 aaKnown RBP eCLIP18.65■□□□□ 0.58
SF3B2-211ENST00000531041 GTF2BQ00403 316 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 PAK2Q13177 524 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 MAPK6Q16659 721 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 FAM26FQ5R3K3 315 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 NT5DC1Q5TFE4 455 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 SMARCE1Q969G3 411 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 LBHD1Q9BQE6 289 aaPredicted RBP18.65■□□□□ 0.58
SF3B2-211ENST00000531041 STRA6Q9BX79 667 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 IFIH1Q9BYX4 1025 aaKnown RBP18.65■□□□□ 0.58
SF3B2-211ENST00000531041 ERVK-5Q9HDB9 667 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 PRMT7Q9NVM4 692 aaPredicted RBP18.65■□□□□ 0.58
SF3B2-211ENST00000531041 TBC1D7Q9P0N9 293 aa18.65■□□□□ 0.58
SF3B2-211ENST00000531041 CEP290O15078 2479 aa18.64■□□□□ 0.58
SF3B2-211ENST00000531041 DENND3A2RUS2 1198 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 K7ENM7 598 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 PPP1R37O75864 691 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 PFKMP08237 780 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 NMT1P30419 496 aaKnown RBP18.64■□□□□ 0.57
SF3B2-211ENST00000531041 CD52P31358 61 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 FPGSQ05932 587 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 PPIGQ13427 754 aaKnown RBP eCLIP18.64■□□□□ 0.574e-7■■■□□ 15.6
SF3B2-211ENST00000531041 ALCAMQ13740 583 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 TAS1R3Q7RTX0 852 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 DEFB128Q7Z7B8 93 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 ERCC4Q92889 916 aaPredicted RBP18.64■□□□□ 0.57
SF3B2-211ENST00000531041 PRIMPOLQ96LW4 560 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 IL23AQ9NPF7 189 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 RMND1Q9NWS8 449 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 ST3GAL5Q9UNP4 418 aa18.64■□□□□ 0.57
SF3B2-211ENST00000531041 ERLIN2O94905 339 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 GCNT3O95395 438 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 PRKCBP05771 671 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 FGFR4P22455 802 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 MLLT1Q03111 559 aaPredicted RBP18.63■□□□□ 0.57
SF3B2-211ENST00000531041 NFX1Q12986 1120 aaKnown RBP18.63■□□□□ 0.57
SF3B2-211ENST00000531041 AMHR2Q16671 573 aa18.63■□□□□ 0.57
SF3B2-211ENST00000531041 KLHL40Q2TBA0 621 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms