RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 DAW1Q8N136 415 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
LTBP3-219ENST00000530990 KCNG4Q8TDN1 519 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 RAD54LQ92698 747 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 KIFC3Q9BVG8 833 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 NFKBIZQ9BYH8 718 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 SEMA6BQ9H3T3 888 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 CHD9Q3L8U1 2897 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 ATG2AQ2TAZ0 1938 aa13.15□□□□□ -0.3
LTBP3-219ENST00000530990 CHD7Q9P2D1 2997 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 NPHP3-ACAD11A0A0J9YXS1 232 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 LINC01553A4QN01 128 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 TSPAN1O60635 241 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 CUTAO60888 179 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 DGKIO75912 1065 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 STAG3L1P0CL83 205 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
LTBP3-219ENST00000530990 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 GATMP50440 423 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
LTBP3-219ENST00000530990 DHX8Q14562 1220 aaKnown RBP13.14□□□□□ -0.31
LTBP3-219ENST00000530990 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 AMHR2Q16671 573 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
LTBP3-219ENST00000530990 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 GPBP1Q86WP2 473 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
LTBP3-219ENST00000530990 GUCD1Q96NT3 240 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 MTMR10Q9NXD2 777 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 DACT1Q9NYF0 836 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 CCDC39Q9UFE4 941 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
LTBP3-219ENST00000530990 MYO9BQ13459 2157 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 B4GALT5O43286 388 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 ATF7P17544 494 aaPredicted RBP13.13□□□□□ -0.31
LTBP3-219ENST00000530990 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
LTBP3-219ENST00000530990 ME1P48163 572 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 KRT85P78386 507 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 GRIN2CQ14957 1233 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 NAALADL2Q58DX5 795 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 ARSHQ5FYA8 562 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
LTBP3-219ENST00000530990 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 ZBTB8OSQ8IWT0 167 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 PDILTQ8N807 584 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 SLC17A8Q8NDX2 589 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
LTBP3-219ENST00000530990 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 REEP2Q9BRK0 252 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 TIPINQ9BVW5 301 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 CHST12Q9NRB3 414 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 KCND2Q9NZV8 630 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 PCDHB7Q9Y5E2 793 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 ATP6V1DQ9Y5K8 247 aa13.13□□□□□ -0.31
LTBP3-219ENST00000530990 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 EPOPA6NHQ4 379 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 SFI1A8K8P3 1242 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 EDN1P05305 212 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 FGFR1P11362 822 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 LIG1P18858 919 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 STAT6P42226 847 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 NPTX2P47972 431 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PEX3P56589 373 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 FAM189BP81408 668 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 DMP1Q13316 513 aaPredicted RBP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PCBP1Q15365 356 aaKnown RBP eCLIP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PAN2Q504Q3 1202 aaKnown RBP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 RRAGBQ5VZM2 374 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 RNF169Q8NCN4 708 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 SPATA32Q96LK8 384 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 CCDC113Q9H0I3 377 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 C2orf40Q9H1Z8 148 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PRDM12Q9H4Q4 367 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
LTBP3-219ENST00000530990 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 RNF19AQ9NV58 838 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 RCOR1Q9UKL0 485 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 MTUS1Q9ULD2 1270 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 STXBP5LQ9Y2K9 1186 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PLXNA4Q9HCM2 1894 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 PHLPP2Q6ZVD8 1323 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 CNTNAP2Q9UHC6 1331 aa13.12□□□□□ -0.31
LTBP3-219ENST00000530990 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms