RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 FER1L6Q2WGJ9 1857 aa18.67■□□□□ 0.58
BRCA2-204ENST00000530893 WDR64B1ANS9 1081 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 SHOX2O60902 331 aaPredicted RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 ZBED4O75132 1171 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 HADHBP55084 474 aaKnown RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 NCKAP1LP55160 1127 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 ZNF280AP59817 542 aaPredicted RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 RPS6P62753 249 aaKnown RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 HAUS6Q7Z4H7 955 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 IQCKQ8N0W5 287 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 SLC35G2Q8TBE7 412 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 IFT81Q8WYA0 676 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 HVCN1Q96D96 273 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 RAVER2Q9HCJ3 691 aaKnown RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 PKD2L1Q9P0L9 805 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 NOC2LQ9Y3T9 749 aaKnown RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 CTDP1Q9Y5B0 961 aaPredicted RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 ASTN2O75129 1339 aaPredicted RBP18.66■□□□□ 0.58
BRCA2-204ENST00000530893 EMSYQ7Z589 1322 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 PPATQ06203 517 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 TCEAL1Q15170 157 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 CD302Q8IX05 232 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 RHOT2Q8IXI1 618 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 RDH13Q8NBN7 331 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 CASKIN2Q8WXE0 1202 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 ZBTB9Q96C00 473 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 HSPBP1Q9NZL4 362 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 EXOC7Q9UPT5 735 aa18.66■□□□□ 0.58
BRCA2-204ENST00000530893 BHMG1C9JSJ3 638 aaPredicted RBP18.65■□□□□ 0.58
BRCA2-204ENST00000530893 RPS12P25398 132 aaKnown RBP18.65■□□□□ 0.58
BRCA2-204ENST00000530893 RNASE9P60153 205 aaKnown RBP18.65■□□□□ 0.58
BRCA2-204ENST00000530893 PPP2R5EQ16537 467 aa18.65■□□□□ 0.58
BRCA2-204ENST00000530893 EPC2Q52LR7 807 aa18.65■□□□□ 0.58
BRCA2-204ENST00000530893 CFAP58Q5T655 872 aa18.65■□□□□ 0.58
BRCA2-204ENST00000530893 KLHL7Q8IXQ5 586 aa18.65■□□□□ 0.58
BRCA2-204ENST00000530893 C1orf131Q8NDD1 294 aaKnown RBP18.65■□□□□ 0.58
BRCA2-204ENST00000530893 JDP2Q8WYK2 163 aa18.65■□□□□ 0.58
BRCA2-204ENST00000530893 AGPAT1Q99943 283 aa18.65■□□□□ 0.58
BRCA2-204ENST00000530893 GOLPH3Q9H4A6 298 aa18.65■□□□□ 0.58
BRCA2-204ENST00000530893 KRIT1O00522 736 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 MAFGO15525 162 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 VCAM1P19320 739 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 PLS1Q14651 629 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 ARHGAP44Q17R89 818 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 MAEAQ7L5Y9 396 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 MAATS1Q7Z4T9 603 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 TAAR1Q96RJ0 339 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 NAP1L3Q99457 506 aaPredicted RBP18.64■□□□□ 0.58
BRCA2-204ENST00000530893 PDCD2LQ9BRP1 358 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 CARD9Q9H257 536 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 PXMP2Q9NR77 195 aa18.64■□□□□ 0.58
BRCA2-204ENST00000530893 PFASO15067 1338 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 ESYT3A0FGR9 886 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 ZSCAN5CA6NGD5 496 aaPredicted RBP18.64■□□□□ 0.57
BRCA2-204ENST00000530893 FOXN3O00409 490 aaPredicted RBP18.64■□□□□ 0.57
BRCA2-204ENST00000530893 SART1O43290 800 aaKnown RBP18.64■□□□□ 0.57
BRCA2-204ENST00000530893 BUB1BO60566 1050 aaPredicted RBP18.64■□□□□ 0.57
BRCA2-204ENST00000530893 EIF2AK2P19525 551 aaKnown RBP18.64■□□□□ 0.57
BRCA2-204ENST00000530893 RNF207Q6ZRF8 634 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 DNAAF5Q86Y56 855 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 CCDC26Q8TAB7 109 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 ZIM3Q96PE6 472 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 RMDN3Q96TC7 470 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 CBWD1Q9BRT8 395 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 PCIF1Q9H4Z3 704 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
BRCA2-204ENST00000530893 HSPA9P38646 679 aaKnown RBP18.63■□□□□ 0.57
BRCA2-204ENST00000530893 SMTNP53814 917 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 DLG4P78352 724 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 PPP3CAQ08209 521 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 SENP7Q9BQF6 1050 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 C17orf75Q9HAS0 396 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 UBE2TQ9NPD8 197 aaPredicted RBP18.63■□□□□ 0.57
BRCA2-204ENST00000530893 OSGEPQ9NPF4 335 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 HOMER2Q9NSB8 354 aa18.63■□□□□ 0.57
BRCA2-204ENST00000530893 DKC1O60832 514 aaKnown RBP eCLIP18.62■□□□□ 0.57
BRCA2-204ENST00000530893 FAM153BP0C7A2 387 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 TGFB2P61812 414 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 SPP2Q13103 211 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 FAM153CQ494X1 144 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 ZNF746Q6NUN9 644 aaPredicted RBP18.62■□□□□ 0.57
BRCA2-204ENST00000530893 LRRC31Q6UY01 552 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 GPRASP2Q96D09 838 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 FAM153AQ9UHL3 310 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 BACH1O14867 736 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 MXI1P50539 228 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 PEX3P56589 373 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 ERVK-9P63128 1117 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 ARHGEF16Q5VV41 709 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 PDGFDQ9GZP0 370 aaPredicted RBP18.62■□□□□ 0.57
BRCA2-204ENST00000530893 TAOK3Q9H2K8 898 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 RPAP3Q9H6T3 665 aaPredicted RBP18.62■□□□□ 0.57
BRCA2-204ENST00000530893 PARP14Q460N5 1801 aa18.62■□□□□ 0.57
BRCA2-204ENST00000530893 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 VWA5AO00534 786 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 LRRN2O75325 713 aa18.61■□□□□ 0.57
BRCA2-204ENST00000530893 MYCLP12524 364 aaPredicted RBP18.61■□□□□ 0.57
BRCA2-204ENST00000530893 ABCB4P21439 1286 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms