RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 TXNDC5Q8NBS9 432 aaKnown RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 SCYL1Q96KG9 808 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 YTHDC1Q96MU7 727 aaKnown RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 CDC42BPGQ6DT37 1551 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 KIF20BQ96Q89 1820 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 FAM90A27PA6NNH2 459 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 NOBOXO60393 691 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 FBXO21O94952 628 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 POU3F3P20264 500 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 PPP2R1AP30153 589 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 GJA4P35212 333 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 IL13P35225 146 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 GLRBP48167 497 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 MLLT6P55198 1093 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 LACTBP83111 547 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 HDAC1Q13547 482 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 RTP5Q14D33 572 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 TTF1Q15361 905 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 ITSN1Q15811 1721 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 C21orf62-AS1Q17RA5 79 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 FNDC3BQ53EP0 1204 aaKnown RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 PPP4R4Q6NUP7 873 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 TRMT10BQ6PF06 316 aaKnown RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 NRKQ7Z2Y5 1582 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 KRT26Q7Z3Y9 468 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 FAM124AQ86V42 546 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 KRTAP17-1Q9BYP8 105 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 ARNT2Q9HBZ2 717 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 SMURF1Q9HCE7 757 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 ARHGAP20Q9P2F6 1191 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 NSD2O96028 1365 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 INSRP06213 1382 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 PPIP5K1Q6PFW1 1433 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 PRAMEF25A6NGN4 478 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 ASMTLO95671 621 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 PFKPQ01813 784 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 PPP2R5AQ15172 486 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 IGSF22Q8N9C0 903 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 DDX1Q92499 740 aaKnown RBP5.15□□□□□ -1.58
PTPRC-214ENST00000530727 TEPSINQ96N21 525 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 CLUHP3Q96NS8 147 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 TMEM168Q9H0V1 697 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 ARHGAP28Q9P2N2 729 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 FTSJ1Q9UET6 329 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 ZFP69BQ9UJL9 534 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 CD2APQ9Y5K6 639 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 RPS6KL1Q9Y6S9 549 aa5.15□□□□□ -1.58
PTPRC-214ENST00000530727 SSH2Q76I76 1423 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.15□□□□□ -1.59
PTPRC-214ENST00000530727 MROH6A6NGR9 719 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 ZNF839A8K0R7 811 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 FYB1O15117 783 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 NPTXRO95502 500 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 KIAA2012Q0VF49 1180 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 DBPQ10586 325 aaPredicted RBP5.15□□□□□ -1.59
PTPRC-214ENST00000530727 TCEA2Q15560 299 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 DDX42Q86XP3 938 aaKnown RBP eCLIP5.15□□□□□ -1.59
PTPRC-214ENST00000530727 ZCCHC14Q8WYQ9 949 aaKnown RBP5.15□□□□□ -1.59
PTPRC-214ENST00000530727 LCORQ96JN0 433 aaPredicted RBP5.15□□□□□ -1.59
PTPRC-214ENST00000530727 ARPC5LQ9BPX5 153 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 SLC39A2Q9NP94 309 aa5.15□□□□□ -1.59
PTPRC-214ENST00000530727 NKTRP30414 1462 aaKnown RBP5.15□□□□□ -1.59
PTPRC-214ENST00000530727 CGNL1Q0VF96 1302 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 XIRP1Q702N8 1843 aaKnown RBP5.14□□□□□ -1.59
PTPRC-214ENST00000530727 ANKARQ7Z5J8 1434 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 SHPRHQ149N8 1683 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 B4E1Z4 1266 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 SCDO00767 359 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 OPA1O60313 960 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 CLASP2O75122 1294 aaKnown RBP5.14□□□□□ -1.59
PTPRC-214ENST00000530727 CNR2P34972 360 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 IGFALSP35858 605 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 EPHB1P54762 984 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 CNGB1Q14028 1251 aaPredicted RBP5.14□□□□□ -1.59
PTPRC-214ENST00000530727 BRD3Q15059 726 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 UBXN11Q5T124 520 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 ERICH6BQ5W0A0 696 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 CPZQ66K79 652 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 BORAQ6PGQ7 559 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 HHIPL2Q6UWX4 724 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 KRBA2Q6ZNG9 492 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 OVCH1Q7RTY7 1134 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 C14orf80Q86SX3 495 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 DDX53Q86TM3 631 aaKnown RBP5.14□□□□□ -1.59
PTPRC-214ENST00000530727 IGDCC4Q8TDY8 1250 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 POLR3AO14802 1390 aaPredicted RBP5.14□□□□□ -1.59
PTPRC-214ENST00000530727 EDC4Q6P2E9 1401 aaKnown RBP5.14□□□□□ -1.59
PTPRC-214ENST00000530727 ADGRL3Q9HAR2 1447 aa5.14□□□□□ -1.59
PTPRC-214ENST00000530727 MAP2P11137 1827 aaKnown RBP5.13□□□□□ -1.59
PTPRC-214ENST00000530727 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 IFRD1O00458 451 aaPredicted RBP5.13□□□□□ -1.59
PTPRC-214ENST00000530727 SMAD2Q15796 467 aaKnown RBP5.13□□□□□ -1.59
PTPRC-214ENST00000530727 TMEM177Q53S58 311 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 ABHD17CQ6PCB6 329 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 SAMD3Q8N6K7 520 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 STPG3Q8N7X2 389 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 C2orf69Q8N8R5 385 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 SLC12A8A0AV02 714 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 ASLP04424 464 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms