RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 TCP11Q8WWU5 503 aa23.36■■□□□ 1.33
SMPD1-204ENST00000530395 FAM105AQ9NUU6 356 aa23.36■■□□□ 1.33
SMPD1-204ENST00000530395 WRAP73Q9P2S5 460 aaPredicted RBP23.36■■□□□ 1.33
SMPD1-204ENST00000530395 FAM205CA6NFA0 338 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 LARGE1O95461 756 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 NEK4P51957 841 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 BCAR1P56945 870 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 SMC1AQ14683 1233 aaKnown RBP23.35■■□□□ 1.33
SMPD1-204ENST00000530395 SRGAP1Q7Z6B7 1085 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 RNF135Q8IUD6 432 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 VN1R2Q8NFZ6 395 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 PRPF31Q8WWY3 499 aaKnown RBP23.35■■□□□ 1.33
SMPD1-204ENST00000530395 TNFRSF25Q93038 417 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 TMEM169Q96HH4 297 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 DYDC2Q96IM9 177 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 IFT122Q9HBG6 1241 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 AGPAT5Q9NUQ2 364 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 RGL1Q9NZL6 768 aa23.35■■□□□ 1.33
SMPD1-204ENST00000530395 SRGAP2CP0DJJ0 459 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 CYP4A11Q02928 519 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 SPIRE1Q08AE8 756 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 EMC2Q15006 297 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 CALCRLQ16602 461 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 XKR9Q5GH70 373 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 TMEM184AQ6ZMB5 413 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 ZNF579Q8NAF0 562 aaKnown RBP23.34■■□□□ 1.33
SMPD1-204ENST00000530395 NSUN7Q8NE18 718 aaKnown RBP23.34■■□□□ 1.33
SMPD1-204ENST00000530395 LPPQ93052 612 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 TMEM143Q96AN5 459 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 PGBD4Q96DM1 585 aa23.34■■□□□ 1.33
SMPD1-204ENST00000530395 BMP2KQ9NSY1 1161 aaPredicted RBP23.34■■□□□ 1.33
SMPD1-204ENST00000530395 HIDE1A8MVS5 230 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 ASAP2O43150 1006 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 ZNF623O75123 536 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 ZC3H11AO75152 810 aaKnown RBP eCLIP23.33■■□□□ 1.33
SMPD1-204ENST00000530395 TECP42680 631 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 RBM10P98175 930 aaKnown RBP23.33■■□□□ 1.33
SMPD1-204ENST00000530395 LAMTOR4Q0VGL1 99 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 CTTNQ14247 550 aaKnown RBP23.33■■□□□ 1.33
SMPD1-204ENST00000530395 HERC4Q5GLZ8 1057 aaPredicted RBP23.33■■□□□ 1.33
SMPD1-204ENST00000530395 TPH2Q8IWU9 490 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 PHF7Q9BWX1 381 aaPredicted RBP23.33■■□□□ 1.33
SMPD1-204ENST00000530395 MUTYHQ9UIF7 546 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 PCDHA12Q9UN75 941 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 INPP5FQ9Y2H2 1132 aa23.33■■□□□ 1.33
SMPD1-204ENST00000530395 CA8P35219 290 aa23.32■■□□□ 1.32
SMPD1-204ENST00000530395 RNASELQ05823 741 aaKnown RBP23.32■■□□□ 1.32
SMPD1-204ENST00000530395 LONRF3Q496Y0 759 aa23.32■■□□□ 1.32
SMPD1-204ENST00000530395 NOMO2Q5JPE7 1267 aa23.32■■□□□ 1.32
SMPD1-204ENST00000530395 ANKRD54Q6NXT1 300 aa23.32■■□□□ 1.32
SMPD1-204ENST00000530395 LLGL2Q6P1M3 1020 aa23.32■■□□□ 1.32
SMPD1-204ENST00000530395 DIS3L2Q8IYB7 885 aaKnown RBP23.32■■□□□ 1.32
SMPD1-204ENST00000530395 CCDC43Q96MW1 224 aaKnown RBP23.32■■□□□ 1.32
SMPD1-204ENST00000530395 MTRQ99707 1265 aa23.32■■□□□ 1.32
SMPD1-204ENST00000530395 PCDHB2Q9Y5E7 798 aa23.32■■□□□ 1.32
SMPD1-204ENST00000530395 LOC730098B7Z3J9 87 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 NT5C1B-RDH14C9J2C7 533 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 NEMFO60524 1076 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 JAK2O60674 1132 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 FOSBP53539 338 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 KCNC3Q14003 757 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 FERMT3Q86UX7 667 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 MRPL43Q8N983 215 aaKnown RBP23.31■■□□□ 1.32
SMPD1-204ENST00000530395 URGCPQ8TCY9 931 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 SUSD6Q92537 303 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 CASP10Q92851 521 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 EIF2AK1Q9BQI3 630 aaKnown RBP23.31■■□□□ 1.32
SMPD1-204ENST00000530395 TBC1D13Q9NVG8 400 aa23.31■■□□□ 1.32
SMPD1-204ENST00000530395 BTBD18B2RXH4 712 aa23.3■■□□□ 1.32
SMPD1-204ENST00000530395 SLITRK3O94933 977 aa23.3■■□□□ 1.32
SMPD1-204ENST00000530395 HOXB8P17481 243 aaPredicted RBP23.3■■□□□ 1.32
SMPD1-204ENST00000530395 MXD4Q14582 209 aaPredicted RBP23.3■■□□□ 1.32
SMPD1-204ENST00000530395 TMEM87AQ8NBN3 555 aa23.3■■□□□ 1.32
SMPD1-204ENST00000530395 RNF149Q8NC42 400 aa23.3■■□□□ 1.32
SMPD1-204ENST00000530395 TTC12Q9H892 705 aaPredicted RBP23.3■■□□□ 1.32
SMPD1-204ENST00000530395 CNTNAP2Q9UHC6 1331 aa23.3■■□□□ 1.32
SMPD1-204ENST00000530395 MUC6Q6W4X9 2439 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 C2orf71A6NGG8 1288 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 OFD1O75665 1012 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 ERLIN2O94905 339 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 CBX2Q14781 532 aaPredicted RBP23.29■■□□□ 1.32
SMPD1-204ENST00000530395 PCBP1Q15365 356 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMPD1-204ENST00000530395 VPS52Q8N1B4 723 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 RPGRIP1Q96KN7 1286 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 GBP3Q9H0R5 595 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 NRDE2Q9H7Z3 1164 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 MINDY3Q9H8M7 445 aa23.29■■□□□ 1.32
SMPD1-204ENST00000530395 MEIS3P2A8K0S8 358 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 ZBTB39O15060 712 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 LYPLA2O95372 231 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 TXKP42681 527 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 GIT2Q14161 759 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 TFDP1Q14186 410 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 SAFBQ15424 915 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMPD1-204ENST00000530395 TPRNQ4KMQ1 711 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 MRPL10Q7Z7H8 261 aaKnown RBP23.28■■□□□ 1.32
SMPD1-204ENST00000530395 IGSF21Q96ID5 467 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 HSD17B14Q9BPX1 270 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 ZBP1Q9H171 429 aa23.28■■□□□ 1.32
SMPD1-204ENST00000530395 S1PR5Q9H228 398 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms