RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 SMAP1Q8IYB5 467 aaPredicted RBP12.77□□□□□ -0.37
SF3B2-208ENST00000529994 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 FAM167AQ96KS9 214 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 RBM28Q9NW13 759 aaKnown RBP12.77□□□□□ -0.37
SF3B2-208ENST00000529994 IRAK3Q9Y616 596 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 CEP250Q9BV73 2442 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 CHMP2AO43633 222 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
SF3B2-208ENST00000529994 LMNAP02545 664 aaKnown RBP12.76□□□□□ -0.37
SF3B2-208ENST00000529994 HMGB1P09429 215 aaKnown RBP12.76□□□□□ -0.37
SF3B2-208ENST00000529994 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
SF3B2-208ENST00000529994 HSPA4P34932 840 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 CLCN4P51793 760 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 SETQ01105 290 aaPredicted RBP12.76□□□□□ -0.37
SF3B2-208ENST00000529994 GIT2Q14161 759 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 LETM2Q2VYF4 491 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 TSGA10IPQ3SY00 556 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 NOMO2Q5JPE7 1267 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 GLB1LQ6UWU2 654 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 DGLUCYQ7Z3D6 616 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 PPFIBP1Q86W92 1011 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 ZNF280BQ86YH2 543 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 BRF1Q92994 677 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 KLHL5Q96PQ7 755 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 HINFPQ9BQA5 517 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 SH2D3AQ9BRG2 576 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 GCOM2Q9BZD3 368 aaPredicted RBP12.76□□□□□ -0.37
SF3B2-208ENST00000529994 DISC1Q9NRI5 854 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 NRBP2Q9NSY0 501 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 CA14Q9ULX7 337 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 PIN4Q9Y237 131 aaKnown RBP12.76□□□□□ -0.37
SF3B2-208ENST00000529994 CACNA1BQ00975 2339 aa12.76□□□□□ -0.37
SF3B2-208ENST00000529994 A0A087WZ62 844 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 TMEM150BA6NC51 233 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 WDR64B1ANS9 1081 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 C2CD2LO14523 706 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 OFD1O75665 1012 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 CNPP09543 421 aaKnown RBP12.75□□□□□ -0.37
SF3B2-208ENST00000529994 CDC27P30260 824 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 TEX2Q8IWB9 1127 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-208ENST00000529994 DOCK8Q8NF50 2099 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 ST13P5Q8NFI4 369 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-208ENST00000529994 GJA10Q969M2 543 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 FDXACB1Q9BRP7 624 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-208ENST00000529994 EMILIN2Q9BXX0 1053 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 GLT8D2Q9H1C3 349 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 CACNA1IQ9P0X4 2223 aa12.75□□□□□ -0.37
SF3B2-208ENST00000529994 DCNP07585 359 aaKnown RBP12.74□□□□□ -0.37
SF3B2-208ENST00000529994 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 AFF1P51825 1210 aaKnown RBP12.74□□□□□ -0.37
SF3B2-208ENST00000529994 MTERF2Q49AM1 385 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 REXO1Q8N1G1 1221 aaKnown RBP12.74□□□□□ -0.37
SF3B2-208ENST00000529994 ZNF710Q8N1W2 664 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 TBC1D17Q9HA65 648 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 MAN1C1Q9NR34 630 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
SF3B2-208ENST00000529994 FAM105AQ9NUU6 356 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
SF3B2-208ENST00000529994 FANCMQ8IYD8 2048 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 DDHD2O94830 711 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 SFPQP23246 707 aaKnown RBP eCLIP12.73□□□□□ -0.37
SF3B2-208ENST00000529994 PSMA5P28066 241 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 AK2P54819 239 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-208ENST00000529994 CATSPER4Q7RTX7 472 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 RHPN2Q8IUC4 686 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 KSR1Q8IVT5 923 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 SLC44A3Q8N4M1 653 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 KCNB2Q92953 911 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 LENG9Q96B70 501 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 MRPL17Q9NRX2 175 aaKnown RBP12.73□□□□□ -0.37
SF3B2-208ENST00000529994 WNT16Q9UBV4 365 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 SEPT9Q9UHD8 586 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-208ENST00000529994 SPTBN2O15020 2390 aa12.73□□□□□ -0.37
SF3B2-208ENST00000529994 DOCK6Q96HP0 2047 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
SF3B2-208ENST00000529994 MSH4O15457 936 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 GAS7O60861 476 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 LILRB3O75022 631 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 RFPL2O75678 378 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 SPATA31D3P0C874 917 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 SKIP12755 728 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 ADD1P35611 737 aaKnown RBP12.72□□□□□ -0.37
SF3B2-208ENST00000529994 TARBP2Q15633 366 aaKnown RBP12.72□□□□□ -0.37
SF3B2-208ENST00000529994 C15orf39Q6ZRI6 1047 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 SPATA31D4Q6ZUB0 917 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 TAS1R1Q7RTX1 841 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 GPR152Q8TDT2 470 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 MYADMQ96S97 322 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms