RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 RHOBTB2Q9BYZ6 727 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 INO80BQ9C086 356 aaPredicted RBP11.77□□□□□ -0.53
COPB1-207ENST00000529866 GBP3Q9H0R5 595 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 NRDE2Q9H7Z3 1164 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 WDR6Q9NNW5 1121 aaKnown RBP11.77□□□□□ -0.53
COPB1-207ENST00000529866 MAN1C1Q9NR34 630 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 ARHGEF3Q9NR81 526 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 EPS15L1Q9UBC2 864 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 PIN4Q9Y237 131 aaKnown RBP11.77□□□□□ -0.53
COPB1-207ENST00000529866 SSX2IPQ9Y2D8 614 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 SIT1Q9Y3P8 196 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 CLUHO75153 1309 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 CNTNAP5Q8WYK1 1306 aa11.77□□□□□ -0.53
COPB1-207ENST00000529866 IGLV3-22A0A075B6J6 115 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 SSBP05455 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
COPB1-207ENST00000529866 URODP06132 367 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 DCNP07585 359 aaKnown RBP11.76□□□□□ -0.53
COPB1-207ENST00000529866 CYP3A4P08684 503 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 CNPP09543 421 aaKnown RBP11.76□□□□□ -0.53
COPB1-207ENST00000529866 SP9P0CG40 484 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 SLC11A1P49279 550 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
COPB1-207ENST00000529866 PRKCEQ02156 737 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 BCL7CQ8WUZ0 217 aaPredicted RBP11.76□□□□□ -0.53
COPB1-207ENST00000529866 PGBD4Q96DM1 585 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 BORCS6Q96GS4 357 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 FAM193BQ96PV7 902 aaPredicted RBP11.76□□□□□ -0.53
COPB1-207ENST00000529866 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 BARHL2Q9NY43 387 aa11.76□□□□□ -0.53
COPB1-207ENST00000529866 FRYLO94915 3013 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 INPPL1O15357 1258 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 GLUD1P00367 558 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 DNM2P50570 870 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 AK2P54819 239 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 RTN1Q16799 776 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
COPB1-207ENST00000529866 JAKMIP3Q5VZ66 844 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 SGMS1Q86VZ5 419 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 SLC44A3Q8N4M1 653 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 GPR161Q8N6U8 529 aaKnown RBP11.75□□□□□ -0.53
COPB1-207ENST00000529866 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 RSAD2Q8WXG1 361 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 LPPQ93052 612 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
COPB1-207ENST00000529866 SHDQ96IW2 340 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 TMEM175Q9BSA9 504 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 FAM105AQ9NUU6 356 aa11.75□□□□□ -0.53
COPB1-207ENST00000529866 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 CCDC195A0A1B0GUA6 201 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 SPTLC1O15269 473 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
COPB1-207ENST00000529866 ZNF623O75123 536 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 CSDE1O75534 798 aaKnown RBP11.74□□□□□ -0.53
COPB1-207ENST00000529866 OFD1O75665 1012 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 SOD2P04179 222 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 LONRF3Q496Y0 759 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 PRR16Q569H4 304 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 DCLRE1AQ6PJP8 1040 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 CATSPER4Q7RTX7 472 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 ZNF410Q86VK4 478 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 SMG7Q92540 1137 aaKnown RBP11.74□□□□□ -0.53
COPB1-207ENST00000529866 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 LRRC2Q9BYS8 371 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 LSG1Q9H089 658 aaKnown RBP11.74□□□□□ -0.53
COPB1-207ENST00000529866 PIDD1Q9HB75 910 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 DISC1Q9NRI5 854 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.74□□□□□ -0.531e-34■■■■□ 19.8
COPB1-207ENST00000529866 KANSL3Q9P2N6 904 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 NCDNQ9UBB6 729 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 FAN1Q9Y2M0 1017 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 V9GY48 417 aaPredicted RBP11.74□□□□□ -0.53
COPB1-207ENST00000529866 CHD8Q9HCK8 2581 aa11.74□□□□□ -0.53
COPB1-207ENST00000529866 C2CD2LO14523 706 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 ZNF862O60290 1169 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 LILRB3O75022 631 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 KRT37O76014 449 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 ALDH2P05091 517 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 SFNP31947 248 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 JAK3P52333 1124 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 APOA5Q6Q788 366 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 REXO1Q8N1G1 1221 aaKnown RBP11.73□□□□□ -0.53
COPB1-207ENST00000529866 DCLK2Q8N568 766 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 PJA1Q8NG27 643 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
COPB1-207ENST00000529866 CRYGNQ8WXF5 182 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 PHKBQ93100 1093 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 RPS6KC1Q96S38 1066 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 MYADMQ96S97 322 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 HERC2P3Q9BVR0 1158 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 BCO2Q9BYV7 579 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 RSAD1Q9HA92 442 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 SLC2A4RGQ9NR83 387 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 DLGAP2Q9P1A6 1054 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 CNTNAP2Q9UHC6 1331 aa11.73□□□□□ -0.53
COPB1-207ENST00000529866 CDV3Q9UKY7 258 aaKnown RBP11.73□□□□□ -0.53
COPB1-207ENST00000529866 A0A087WZ62 844 aa11.72□□□□□ -0.53
COPB1-207ENST00000529866 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms