RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 USP18Q9UMW8 372 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 SLC30A4O14863 429 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 CYP21A2P08686 494 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 ZNF654Q8IZM8 581 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 NETO1Q8TDF5 533 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 ZNF707Q96C28 371 aaPredicted RBP13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 RPS6KC1Q96S38 1066 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 NELL2Q99435 816 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 KANSL3Q9P2N6 904 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 GMEB2Q9UKD1 530 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 PCDHA10Q9Y5I2 948 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 BAHCC1Q9P281 2608 aa13.17□□□□□ -0.3
AMBRA1-207ENST00000529553 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 LRP3O75074 770 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 LRRN2O75325 713 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 GLUD1P00367 558 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 SOD2P04179 222 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 PSAPP07602 524 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 CALM1P0DP23 149 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 CALM2P0DP24 149 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 CALM3P0DP25 149 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 ZNF76P36508 570 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 RAB27AP51159 221 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 GPC5P78333 572 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 SLC44A4Q53GD3 710 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 PPM1JQ5JR12 505 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 DDX1Q92499 740 aaKnown RBP13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 PHKBQ93100 1093 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 CLDN23Q96B33 292 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 PGBD4Q96DM1 585 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 INO80BQ9C086 356 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 NT5C3AQ9H0P0 336 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 ZDHHC7Q9NXF8 308 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 FAN1Q9Y2M0 1017 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 NUMBLQ9Y6R0 609 aa13.16□□□□□ -0.3
AMBRA1-207ENST00000529553 ATRXP46100 2492 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 FAM170BA6NMN3 283 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 E7EWF7 191 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 DDX39AO00148 427 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 IPO5O00410 1097 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 NCAM2O15394 837 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 TEX28O15482 410 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 URODP06132 367 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 SREBF1P36956 1147 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 RPS9P46781 194 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 NRLP54845 237 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 PFKPQ01813 784 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 SNW1Q13573 536 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 MLF2Q15773 248 aaPredicted RBP13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 LRRC71Q8N4P6 559 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 URGCPQ8TCY9 931 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 SCLT1Q96NL6 688 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 PIDD1Q9HB75 910 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 PARD6AQ9NPB6 346 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
AMBRA1-207ENST00000529553 NRP1O14786 923 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 GAS2O43903 313 aaKnown RBP13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 FOXD2O60548 495 aaPredicted RBP13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 RFPL2O75678 378 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 FGFR4P22455 802 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 SFPQP23246 707 aaKnown RBP eCLIP13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 AK2P54819 239 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 ANTXR2P58335 489 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 DMWDQ09019 674 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 TWF2Q6IBS0 349 aaKnown RBP13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 HEATR3Q7Z4Q2 680 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 CELF5Q8N6W0 485 aaKnown RBP13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 LPPQ93052 612 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 FAM193BQ96PV7 902 aaPredicted RBP13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 HERC2P3Q9BVR0 1158 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 ANO3Q9BYT9 981 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 ANGPTL2Q9UKU9 493 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 INPP5FQ9Y2H2 1132 aa13.14□□□□□ -0.31
AMBRA1-207ENST00000529553 DDHD2O94830 711 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms