RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 LARSQ9P2J5 1176 aaKnown RBP12.6□□□□□ -0.39
CHD7-209ENST00000529472 PADI3Q9ULW8 664 aa12.6□□□□□ -0.39
CHD7-209ENST00000529472 K7ENM7 598 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 SLC16A4O15374 487 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
CHD7-209ENST00000529472 GAP43P17677 238 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHD7-209ENST00000529472 SMTNP53814 917 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 MBTD1Q05BQ5 628 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 COASYQ13057 564 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 PNOCQ13519 176 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 POSTNQ15063 836 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 TCTN1Q2MV58 587 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
CHD7-209ENST00000529472 KANK3Q6NY19 840 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 CATSPER4Q7RTX7 472 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 FAM178BQ8IXR5 827 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 USP38Q8NB14 1042 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 DBF4BQ8NFT6 615 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 SEPT8Q92599 483 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 NFKBIZQ9BYH8 718 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 C2orf40Q9H1Z8 148 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 TBC1D7Q9P0N9 293 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 ST3GAL5Q9UNP4 418 aa12.59□□□□□ -0.39
CHD7-209ENST00000529472 FRMD3A2A2Y4 597 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 GPR182O15218 404 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 TRAK2O60296 914 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 ERLIN2O94905 339 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 PFKMP08237 780 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 MCM4P33991 863 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 POU5F1BQ06416 359 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 CNKSR3Q6P9H4 555 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 C16orf59Q7L2K0 433 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 SRGAP1Q7Z6B7 1085 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 IFNLR1Q8IU57 520 aaPredicted RBP12.58□□□□□ -0.4
CHD7-209ENST00000529472 GPT2Q8TD30 523 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 SPIRE2Q8WWL2 714 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 TIGD1Q96MW7 591 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 UBE2OQ9C0C9 1292 aaKnown RBP12.58□□□□□ -0.4
CHD7-209ENST00000529472 MRPL44Q9H9J2 332 aaKnown RBP12.58□□□□□ -0.4
CHD7-209ENST00000529472 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 HOOK1Q9UJC3 728 aaKnown RBP12.58□□□□□ -0.4
CHD7-209ENST00000529472 SQORQ9Y6N5 450 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 PHLPP2Q6ZVD8 1323 aa12.58□□□□□ -0.4
CHD7-209ENST00000529472 DENND3A2RUS2 1198 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 PRKCBP05771 671 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 MYL1P05976 194 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 ACTN1P12814 892 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 NMT1P30419 496 aaKnown RBP12.57□□□□□ -0.4
CHD7-209ENST00000529472 EFNA5P52803 228 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 NCKAP1LP55160 1127 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 DPYDQ12882 1025 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 MAPK6Q16659 721 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 PSRC1Q6PGN9 363 aaPredicted RBP12.57□□□□□ -0.4
CHD7-209ENST00000529472 UNC13DQ70J99 1090 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 ZNF365Q70YC5 407 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 OTOP2Q7RTS6 562 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 TMEM161BQ8NDZ6 487 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 APBB2Q92870 758 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 ERCC4Q92889 916 aaPredicted RBP12.57□□□□□ -0.4
CHD7-209ENST00000529472 GDF15Q99988 308 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.57□□□□□ -0.42e-8■■■■□ 19.5
CHD7-209ENST00000529472 CCDC113Q9H0I3 377 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 PRMT7Q9NVM4 692 aaPredicted RBP12.57□□□□□ -0.4
CHD7-209ENST00000529472 ARHGAP28Q9P2N2 729 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 SEL1LQ9UBV2 794 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 PIN4Q9Y237 131 aaKnown RBP12.57□□□□□ -0.4
CHD7-209ENST00000529472 USP20Q9Y2K6 914 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 MICAL3Q7RTP6 2002 aa12.57□□□□□ -0.4
CHD7-209ENST00000529472 ZBBXA8MT70 800 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 H0YCG3 227 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 K7ERI5 159 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 B4GALT5O43286 388 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 KLRC4O43908 158 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 MGEA5O60502 916 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 TSPAN1O60635 241 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 GCNT3O95395 438 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 FGBP02675 491 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 RPN1P04843 607 aaKnown RBP12.56□□□□□ -0.4
CHD7-209ENST00000529472 EDN1P05305 212 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 MAPTP10636 758 aaKnown RBP12.56□□□□□ -0.4
CHD7-209ENST00000529472 IBSPP21815 317 aaPredicted RBP12.56□□□□□ -0.4
CHD7-209ENST00000529472 STRN3Q13033 797 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 PRPF4BQ13523 1007 aaKnown RBP12.56□□□□□ -0.4
CHD7-209ENST00000529472 IKBKEQ14164 716 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 CAMK4Q16566 473 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 AMHR2Q16671 573 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 ZC2HC1CQ53FD0 456 aaPredicted RBP12.56□□□□□ -0.4
CHD7-209ENST00000529472 FAM26FQ5R3K3 315 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 TMEM240Q5SV17 173 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 TAS1R3Q7RTX0 852 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms