RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 GAS2O43903 313 aaKnown RBP17.5■□□□□ 0.39
CTSB-215ENST00000528965 STBD1O95210 358 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 P4HBP07237 508 aaKnown RBP17.5■□□□□ 0.39
CTSB-215ENST00000528965 RFC5P40937 340 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 RNASELQ05823 741 aaKnown RBP17.5■□□□□ 0.39
CTSB-215ENST00000528965 PTPN21Q16825 1174 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 NOMO2Q5JPE7 1267 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 PLA2G4FQ68DD2 849 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 SYCE2Q6PIF2 218 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 ALYREFQ86V81 257 aaKnown RBP17.5■□□□□ 0.39
CTSB-215ENST00000528965 URGCPQ8TCY9 931 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 PSPC1Q8WXF1 523 aaKnown RBP17.5■□□□□ 0.39
CTSB-215ENST00000528965 WASF1Q92558 559 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 CEP170P1Q96L14 293 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 AIFM3Q96NN9 605 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 SH2D3AQ9BRG2 576 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 PHF20Q9BVI0 1012 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 APOL5Q9BWW9 433 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 KCNMB3Q9NPA1 279 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 PPP4R2Q9NY27 417 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 KCNJ14Q9UNX9 436 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 INPP5FQ9Y2H2 1132 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 COL4A3BPQ9Y5P4 624 aa17.5■□□□□ 0.39
CTSB-215ENST00000528965 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.49■□□□□ 0.39
CTSB-215ENST00000528965 CCNT1O60563 726 aaKnown RBP17.49■□□□□ 0.39
CTSB-215ENST00000528965 VPS52Q8N1B4 723 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 RIPOR3Q96MK2 946 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 LARP6Q9BRS8 491 aaKnown RBP17.49■□□□□ 0.39
CTSB-215ENST00000528965 ADAM7Q9H2U9 754 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 BRMS1Q9HCU9 246 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 AGPAT5Q9NUQ2 364 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 VAV3Q9UKW4 847 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 HCFC2Q9Y5Z7 792 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 C5orf42Q9H799 3197 aa17.49■□□□□ 0.39
CTSB-215ENST00000528965 NT5C1B-RDH14C9J2C7 533 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 ZNF623O75123 536 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 CXCL14O95715 111 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 MTHFRP42898 656 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 PTPN5P54829 565 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 SCRN1Q12765 414 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 OTUD6AQ7L8S5 288 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 SRGAP1Q7Z6B7 1085 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 DDX53Q86TM3 631 aaKnown RBP17.48■□□□□ 0.39
CTSB-215ENST00000528965 SLFN12Q8IYM2 578 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 FBXL6Q8N531 539 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 TCP11Q8WWU5 503 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 LPPQ93052 612 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 LXNQ9BS40 222 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 ZBP1Q9H171 429 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 TBC1D13Q9NVG8 400 aa17.48■□□□□ 0.39
CTSB-215ENST00000528965 CNTNAP2Q9UHC6 1331 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 EML1O00423 815 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 CLASP2O75122 1294 aaKnown RBP17.47■□□□□ 0.39
CTSB-215ENST00000528965 BAG4O95429 457 aaKnown RBP17.47■□□□□ 0.39
CTSB-215ENST00000528965 YWHABP31946 246 aaKnown RBP17.47■□□□□ 0.39
CTSB-215ENST00000528965 MRE11P49959 708 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 ANKRD1Q15327 319 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 EPHA7Q15375 998 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 ERICH6BQ5W0A0 696 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 PPFIBP1Q86W92 1011 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 KSR1Q8IVT5 923 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 C4orf19Q8IY42 314 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 IGSF21Q96ID5 467 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 DHX33Q9H6R0 707 aaKnown RBP17.47■□□□□ 0.39
CTSB-215ENST00000528965 PCDHB2Q9Y5E7 798 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 IRAK3Q9Y616 596 aa17.47■□□□□ 0.39
CTSB-215ENST00000528965 PFKFB2O60825 505 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 CTSAP10619 480 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 SP100P23497 879 aaPredicted RBP17.46■□□□□ 0.39
CTSB-215ENST00000528965 NPEPPSP55786 919 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 EMC2Q15006 297 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 PCBP1Q15365 356 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTSB-215ENST00000528965 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 NCAPH2Q6IBW4 605 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 PRPF31Q8WWY3 499 aaKnown RBP17.46■□□□□ 0.39
CTSB-215ENST00000528965 FAM193BQ96PV7 902 aaPredicted RBP17.46■□□□□ 0.39
CTSB-215ENST00000528965 GBP3Q9H0R5 595 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 ZSWIM4Q9H7M6 989 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 NRDE2Q9H7Z3 1164 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 RSAD1Q9HA92 442 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 IFT122Q9HBG6 1241 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 KANSL3Q9P2N6 904 aa17.46■□□□□ 0.39
CTSB-215ENST00000528965 SPDYE4A6NLX3 237 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 ASAP2O43150 1006 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 OFD1O75665 1012 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 ERLIN2O94905 339 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 GALTP07902 379 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 SRGAP2CP0DJJ0 459 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 LAMTOR4Q0VGL1 99 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 TMEM173Q86WV6 379 aaPredicted RBP17.45■□□□□ 0.38
CTSB-215ENST00000528965 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 UBALD2Q8IYN6 164 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 TDRD5Q8NAT2 981 aaKnown RBP17.45■□□□□ 0.38
CTSB-215ENST00000528965 CNNM3Q8NE01 707 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
CTSB-215ENST00000528965 CCDC43Q96MW1 224 aaKnown RBP17.45■□□□□ 0.38
CTSB-215ENST00000528965 UBN1Q9NPG3 1134 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms