RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 DCAF12L1Q5VU92 463 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 GLYCTKQ8IVS8 523 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 BBXQ8WY36 941 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ARHGEF26Q96DR7 871 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 PRMT6Q96LA8 375 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 MXRA8Q9BRK3 442 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ERP44Q9BS26 406 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 TMEM109Q9BVC6 243 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 IKZF4Q9H2S9 585 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 WRAP73Q9P2S5 460 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 CNOT7Q9UIV1 285 aaKnown RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 COG5Q9UP83 839 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 NR2E1Q9Y466 385 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 SAMM50Q9Y512 469 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ZNF646O15015 1829 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 RPTORQ8N122 1335 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 IGSF9BQ9UPX0 1349 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 KIAA0391O15091 583 aaKnown RBP9.06□□□□□ -0.96
CSTF3-208ENST00000528865 PLSCR1O15162 318 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 DHX15O43143 795 aaKnown RBP9.06□□□□□ -0.96
CSTF3-208ENST00000528865 TRAPPC3O43617 180 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 HIP1RO75146 1068 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 RTN2O75298 545 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CFBP00751 764 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 GZMAP12544 262 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 KRT13P13646 458 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CHRNB2P17787 502 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 VCAM1P19320 739 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CTNNA2P26232 953 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 GBP1P32455 592 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 PEX5P50542 639 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CYP2J2P51589 502 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 HSD17B4P51659 736 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 GPC5P78333 572 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 GTF2BQ00403 316 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 DHX9Q08211 1270 aaKnown RBP9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CYP1B1Q16678 543 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 ODR4Q5SWX8 454 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 C1orf220Q5T0J3 134 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 ZDHHC24Q6UX98 284 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 MMS22LQ6ZRQ5 1243 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 INTS8Q75QN2 995 aaKnown RBP9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CROCCP2Q86T23 111 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 KSR1Q8IVT5 923 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CNPY4Q8N129 248 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 MICALL1Q8N3F8 863 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 ACER1Q8TDN7 264 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 FAM151AQ8WW52 585 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 ACCSQ96QU6 501 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 ZNF577Q9BSK1 485 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 TIPINQ9BVW5 301 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CELF4Q9BZC1 486 aaKnown RBP9.06□□□□□ -0.96
CSTF3-208ENST00000528865 THAP2Q9H0W7 228 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 EPB41L4BQ9H329 900 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSTF3-208ENST00000528865 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 CNOT8Q9UFF9 292 aaKnown RBP9.06□□□□□ -0.96
CSTF3-208ENST00000528865 PCYOX1Q9UHG3 505 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 ALG6Q9Y672 507 aa9.06□□□□□ -0.96
CSTF3-208ENST00000528865 GOLGA6L10A0A0M3HER8 536 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ARHGEF35A5YM69 484 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PODXLO00592 558 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 EXOC3O60645 756 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PHF2O75151 1096 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 P4HBP07237 508 aaKnown RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 TRIM49P0CI25 452 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 TRIM49CP0CI26 452 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 CHRNA3P32297 505 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ECE1P42892 770 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PTGER2P43116 358 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 VAMP7P51809 220 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SEC24CP53992 1094 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 MAP3K10Q02779 954 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ENPEPQ07075 957 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PPP3CAQ08209 521 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 CETN1Q12798 172 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 BYSLQ13895 437 aaKnown RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PLCB4Q15147 1175 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SKIDA1Q1XH10 827 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 TNFAIP8L3Q5GJ75 292 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 FKBP1CQ5VVH2 108 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ICE2Q659A1 982 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SLC30A10Q6XR72 485 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 ARMC9Q7Z3E5 817 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 KRT27Q7Z3Y8 459 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 FAM71AQ8IYT1 594 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SAMD3Q8N6K7 520 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 OTUD6BQ8N6M0 293 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PRPF38AQ8NAV1 312 aaKnown RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 PROCA1Q8NCQ7 364 aaPredicted RBP9.05□□□□□ -0.96
CSTF3-208ENST00000528865 BANK1Q8NDB2 785 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SLC17A8Q8NDX2 589 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 SUPT20HQ8NEM7 779 aa9.05□□□□□ -0.96
CSTF3-208ENST00000528865 OR2W6PQ8NHA6 318 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms