RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	SPPL3	Q8TCT6	385 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	NSUN3	Q9H649	340 aa	Known RBP	13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	FAM105A	Q9NUU6	356 aa		13.07	□□□□□ -0.32
PSMC3-205	ENST00000528362	ARHGEF35	A5YM69	484 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	MEIS3P2	A8K0S8	358 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	TSPAN1	O60635	241 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	ZNF623	O75123	536 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	LAG3	P18627	525 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	RAB27A	P51159	221 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	MBTD1	Q05BQ5	628 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	POU5F1B	Q06416	359 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	TFDP1	Q14186	410 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	COL19A1	Q14993	1142 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	AMHR2	Q16671	573 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	LONRF3	Q496Y0	759 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	UBXN11	Q5T124	520 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	SPOUT1	Q5T280	376 aa	Known RBP	13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	PADI6	Q6TGC4	694 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	MCPH1	Q8NEM0	835 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	HELQ	Q8TDG4	1101 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	SNX29	Q8TEQ0	813 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	LPP	Q93052	612 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	MMTAG2	Q9BU76	263 aa	Known RBP	13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	NFKBIZ	Q9BYH8	718 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	RAB34	Q9BZG1	259 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	UBE2Z	Q9H832	354 aa	Predicted RBP	13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	PCDHB12	Q9Y5F1	795 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	EVPL	Q92817	2033 aa		13.06	□□□□□ -0.32
PSMC3-205	ENST00000528362	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	INO80B-WBP1	J3KQ70	363 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	FGF18	O76093	207 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	ERLIN2	O94905	339 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	SKI	P12755	728 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	BMP1	P13497	986 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	CYP11B2	P19099	503 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	CDC25A	P30304	524 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	IRS1	P35568	1242 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	PBX3	P40426	434 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	AAK1	Q2M2I8	961 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	DTHD1	Q6ZMT9	781 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	POF1B	Q8WVV4	589 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	BSND	Q8WZ55	320 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	SYMPK	Q92797	1274 aa	Known RBP	13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	AAAS	Q9NRG9	546 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	DDX19A	Q9NUU7	478 aa	Known RBP	13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	KIAA1024	Q9UPX6	916 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	PCDHB2	Q9Y5E7	798 aa		13.05	□□□□□ -0.32
PSMC3-205	ENST00000528362	LRRIQ4	A6NIV6	560 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	B4GALT5	O43286	388 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	HYAL1	Q12794	435 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	CSPP1	Q1MSJ5	1256 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	KRT79	Q5XKE5	535 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	KCNT2	Q6UVM3	1135 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	GLB1L	Q6UWU2	654 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	AGMO	Q6ZNB7	445 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	MRPL10	Q7Z7H8	261 aa	Known RBP	13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	THNSL1	Q8IYQ7	743 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	ADAMTS19	Q8TE59	1207 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	CPB2	Q96IY4	423 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	ZNF558	Q96NG5	402 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	EIF2A	Q9BY44	585 aa	Known RBP	13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	MRPL9	Q9BYD2	267 aa	Known RBP	13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	BHMT2	Q9H2M3	363 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	PCDHGC5	Q9Y5F6	944 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	STK24	Q9Y6E0	443 aa		13.04	□□□□□ -0.32
PSMC3-205	ENST00000528362	WDR81	Q562E7	1941 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	VPS37C	A5D8V6	355 aa	Predicted RBP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362		K7ELQ4	463 aa	Predicted RBP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	OFD1	O75665	1012 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	ARF4	P18085	180 aa	Predicted RBP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	KCNA5	P22460	613 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	AXL	P30530	894 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	UBE3A	Q05086	875 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	NOMO2	Q5JPE7	1267 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	NOTUM	Q6P988	496 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	KCNK18	Q7Z418	384 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	BRAP	Q7Z569	592 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	ADGRD2	Q7Z7M1	963 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	SMG8	Q8ND04	991 aa	Known RBP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	RSPH1	Q8WYR4	309 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	PABPC5	Q96DU9	382 aa	Known RBP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	CCDC51	Q96ER9	411 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	INTS4	Q96HW7	963 aa	Known RBP	13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	INPP5F	Q9Y2H2	1132 aa		13.03	□□□□□ -0.32
PSMC3-205	ENST00000528362	VWA3A	A6NCI4	1184 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362		E9PMD0	336 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	FSCN2	O14926	492 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	B4GALT3	O60512	393 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	EYA4	O95677	639 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	NCL	P19338	710 aa	Known RBP	13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	PDC	P20941	246 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	SYT1	P21579	422 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	PPM1A	P35813	382 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	AFF1	P51825	1210 aa	Known RBP	13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	PLCB3	Q01970	1234 aa		13.02	□□□□□ -0.33
PSMC3-205	ENST00000528362	CTC1	Q2NKJ3	1217 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms