RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ARHGEF26Q96DR7 871 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 CALR3Q96L12 384 aaKnown RBP19.08■□□□□ 0.64
USH1C-205ENST00000527020 ZIM3Q96PE6 472 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 AP1M1Q9BXS5 423 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 ST6GALNAC4Q9H4F1 302 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 GPRC5CQ9NQ84 441 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 TBC1D22BQ9NU19 505 aa19.08■□□□□ 0.64
USH1C-205ENST00000527020 MAP3K20Q9NYL2 800 aaKnown RBP19.08■□□□□ 0.64
USH1C-205ENST00000527020 DOCK1Q14185 1865 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 GOLGA6CA6NDK9 693 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 GOLGA6DP0CG33 693 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 KRT13P13646 458 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 ERVK-9P63128 1117 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 HAUS6Q7Z4H7 955 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 IQCKQ8N0W5 287 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 PIK3R5Q8WYR1 880 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 GOLGA6AQ9NYA3 693 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 HSPBP1Q9NZL4 362 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 DOCK5Q9H7D0 1870 aa19.07■□□□□ 0.64
USH1C-205ENST00000527020 ARID2Q68CP9 1835 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 RFX1P22670 979 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 ECHS1P30084 290 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 MTMR2Q13614 643 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 TTMPQ5BVD1 217 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 C4orf19Q8IY42 314 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 FAM76AQ8TAV0 307 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 ARL8AQ96BM9 186 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 WNK4Q96J92 1243 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 PDCD2LQ9BRP1 358 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 FAM170AA1A519 330 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 GOLGA8KD6RF30 607 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 CTNND1O60716 968 aaKnown RBP19.06■□□□□ 0.64
USH1C-205ENST00000527020 SHOX2O60902 331 aaPredicted RBP19.06■□□□□ 0.64
USH1C-205ENST00000527020 HSF2BPO75031 334 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 CLSTN1O94985 981 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 MYCLP12524 364 aaPredicted RBP19.06■□□□□ 0.64
USH1C-205ENST00000527020 ITGA4P13612 1032 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 ABCB4P21439 1286 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 TNFAIP3P21580 790 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 NCKAP1LP55160 1127 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 ZNF280AP59817 542 aaPredicted RBP19.06■□□□□ 0.64
USH1C-205ENST00000527020 FOXR1Q6PIV2 292 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 SLC20A1Q8WUM9 679 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 PXMP2Q9NR77 195 aa19.06■□□□□ 0.64
USH1C-205ENST00000527020 ZNFX1Q9P2E3 1918 aaKnown RBP19.06■□□□□ 0.64
USH1C-205ENST00000527020 BRCA1P38398 1863 aaKnown RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 SLC16A4O15374 487 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 DDX3YO15523 660 aaKnown RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 OPA1O60313 960 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 CCDC172P0C7W6 258 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 GCLMP48507 274 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 GUCY2FP51841 1108 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 PLA2G4FQ68DD2 849 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 FMNL3Q8IVF7 1028 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 SAMD3Q8N6K7 520 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 XXYLT1Q8NBI6 393 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 FBXO41Q8TF61 875 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 CCDC43Q96MW1 224 aaKnown RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 RMDN3Q96TC7 470 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 AGPAT1Q99943 283 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 THAP2Q9H0W7 228 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 ISCUQ9H1K1 167 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 UBE2TQ9NPD8 197 aaPredicted RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 P4HA2O15460 535 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 SART1O43290 800 aaKnown RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 ADRB2P07550 413 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 PEX3P56589 373 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 MCCD1P59942 119 aaPredicted RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 TBC1D10BQ4KMP7 808 aaPredicted RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 DCAF12L1Q5VU92 463 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 PROCA1Q8NCQ7 364 aaPredicted RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 WHAMMQ8TF30 809 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 TRERF1Q96PN7 1200 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 DDX47Q9H0S4 455 aaKnown RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 RPAP3Q9H6T3 665 aaPredicted RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 RGS17Q9UGC6 210 aaPredicted RBP19.05■□□□□ 0.64
USH1C-205ENST00000527020 AMFRQ9UKV5 643 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 COG5Q9UP83 839 aa19.05■□□□□ 0.64
USH1C-205ENST00000527020 MAPK13O15264 365 aa19.04■□□□□ 0.64
USH1C-205ENST00000527020 PSMC5P62195 406 aa19.04■□□□□ 0.64
USH1C-205ENST00000527020 PPFIA1Q13136 1202 aa19.04■□□□□ 0.64
USH1C-205ENST00000527020 RNF207Q6ZRF8 634 aa19.04■□□□□ 0.64
USH1C-205ENST00000527020 TRMT1LQ7Z2T5 733 aaKnown RBP19.04■□□□□ 0.64
USH1C-205ENST00000527020 CTNNBL1Q8WYA6 563 aaPredicted RBP19.04■□□□□ 0.64
USH1C-205ENST00000527020 TIPINQ9BVW5 301 aa19.04■□□□□ 0.64
USH1C-205ENST00000527020 TAF1DQ9H5J8 278 aaPredicted RBP19.04■□□□□ 0.64
USH1C-205ENST00000527020 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
USH1C-205ENST00000527020 ZNF233A6NK53 670 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 TNFAIP1Q13829 316 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 EIF1ADQ8N9N8 165 aaKnown RBP19.03■□□□□ 0.64
USH1C-205ENST00000527020 KAT5Q92993 513 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 TMEM117Q9H0C3 514 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 GINM1Q9NU53 330 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 TTC7AQ9ULT0 858 aaPredicted RBP19.03■□□□□ 0.64
USH1C-205ENST00000527020 ANKRD62A6NC57 917 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 CCDC188H7C350 402 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 KRIT1O00522 736 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 VWA5AO00534 786 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 ADSSP30520 456 aa19.03■□□□□ 0.64
USH1C-205ENST00000527020 JAK3P52333 1124 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms