RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SPATA31A6Q5VVP1 1343 aa4.35□□□□□ -1.71
ECHDC1-219ENST00000526299 TRIM24O15164 1050 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 GYPEP15421 78 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 KIR2DL3P43628 341 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 PTH2RP49190 550 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 USP14P54578 494 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 TAP1Q03518 808 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 EPHA10Q5JZY3 1008 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 SLFN12LQ6IEE8 588 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 FBXO42Q6P3S6 717 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 APBB1IPQ7Z5R6 666 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 SCLYQ96I15 445 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 KCNH6Q9H252 994 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 C14orf93Q9H972 538 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 KCMF1Q9P0J7 381 aa4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 EIF2B4Q9UI10 523 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-219ENST00000526299 CFBP00751 764 aa4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 ITGB6P18564 788 aa4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 KIF11P52732 1056 aa4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 LONRF2Q1L5Z9 754 aa4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 TMEM177Q53S58 311 aa4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 ABHD17CQ6PCB6 329 aa4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 GSTCDQ8NEC7 633 aa4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 CPPED1Q9BRF8 314 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-219ENST00000526299 TCRBV16S1A1N1A0A5B0 115 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 UBA6A0AVT1 1052 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 TMEM200CA6NKL6 621 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 ZNF185O15231 689 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 NPTXRO95502 500 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 TYRP1P17643 537 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 APOBEC3AP31941 199 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 FNTBP49356 437 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 PRAMEF9Q5VWM5 478 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 CCDC62Q6P9F0 684 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 BMP8AQ7Z5Y6 402 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 CMTR2Q8IYT2 770 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 TUBGCP5Q96RT8 1024 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 BOCQ9BWV1 1114 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 SLC46A2Q9BY10 475 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 CPEB1Q9BZB8 566 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 HAPLN2Q9GZV7 340 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 SYBUQ9NX95 663 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 TRPM5Q9NZQ8 1165 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 SYNPO2Q9UMS6 1093 aa4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 POLR2AP24928 1970 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-219ENST00000526299 DVL2O14641 736 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 MTSS1O43312 755 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 HOXA3O43365 443 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 TTC38Q5R3I4 469 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 SP5Q6BEB4 398 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 OTOP1Q7RTM1 612 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 FGD2Q7Z6J4 655 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 ARHGEF19Q8IW93 802 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 LCORLQ8N3X6 602 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 LILRA3Q8N6C8 439 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 EPC1Q9H2F5 836 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 ING3Q9NXR8 418 aa4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 TESQ9UGI8 421 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 EPN1Q9Y6I3 576 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 COL11A2P13942 1736 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-219ENST00000526299 NCR1O76036 304 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 PLA2G5P39877 138 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 FOXI1Q12951 378 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 VPS72Q15906 364 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 ARHGAP44Q17R89 818 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 PRR16Q569H4 304 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 TRIM61Q5EBN2 209 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 ZC3H12BQ5HYM0 836 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 ZNF362Q5T0B9 420 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 BRAPQ7Z569 592 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 OR52N2Q8NGI0 321 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 NDC1Q9BTX1 674 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 ENKD1Q9H0I2 346 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 ACSS2Q9NR19 701 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 SIRPGQ9P1W8 387 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 INSL6Q9Y581 213 aa4.3□□□□□ -1.72
ECHDC1-219ENST00000526299 NDUFA10O95299 355 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 AVPR1BP47901 424 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 SEC24CP53992 1094 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 BCAR1P56945 870 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 MYBPC3Q14896 1274 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 FAM98AQ8NCA5 519 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 LINC00476Q8WZB0 136 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 RPGRQ92834 1020 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 CAVIN3Q969G5 261 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 UIMC1Q96RL1 719 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 LSM14BQ9BX40 385 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 AKIP1Q9NQ31 210 aa4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.29□□□□□ -1.72
ECHDC1-219ENST00000526299 ARHGEF17Q96PE2 2063 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 M0R2C6 588 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 LEFTY2O00292 366 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 RNASET2O00584 256 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 DNAJC6O75061 913 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 APOL3O95236 402 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 CYP17A1P05093 508 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 CXCR5P32302 372 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 MECP2P51608 486 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 METTL24Q5JXM2 366 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 GDF7Q7Z4P5 450 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms