RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 FGF18O76093 207 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 EOMESO95936 686 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 LAG3P18627 525 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 RPA1P27694 616 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 HOXA11P31270 313 aaPredicted RBP14.94□□□□□ -0.02
USH1C-203ENST00000526181 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.02
USH1C-203ENST00000526181 UBXN11Q5T124 520 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 EP400NLQ6ZTU2 488 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 THNSL1Q8IYQ7 743 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 ERMNQ8TAM6 284 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 UHRF1Q96T88 793 aaPredicted RBP14.94□□□□□ -0.02
USH1C-203ENST00000526181 TRAIPQ9BWF2 469 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.94□□□□□ -0.02
USH1C-203ENST00000526181 AAASQ9NRG9 546 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 LRWD1Q9UFC0 647 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 DBR1Q9UK59 544 aaKnown RBP14.94□□□□□ -0.02
USH1C-203ENST00000526181 PCDHB12Q9Y5F1 795 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 PLXNA4Q9HCM2 1894 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 H3BQV1 296 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 LINC01565O15544 149 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 XRCC6P12956 609 aaKnown RBP eCLIP14.93□□□□□ -0.02
USH1C-203ENST00000526181 CCT6AP40227 531 aaKnown RBP14.93□□□□□ -0.02
USH1C-203ENST00000526181 PTENP60484 403 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 MBTD1Q05BQ5 628 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 MXD4Q14582 209 aaPredicted RBP14.93□□□□□ -0.02
USH1C-203ENST00000526181 COL19A1Q14993 1142 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.93□□□□□ -0.02
USH1C-203ENST00000526181 PABPC5Q96DU9 382 aaKnown RBP14.93□□□□□ -0.02
USH1C-203ENST00000526181 CPB2Q96IY4 423 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 NACC1Q96RE7 527 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 IGFLR1Q9H665 355 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 CLDND1Q9NY35 253 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 PCDHB2Q9Y5E7 798 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 VCANP13611 3396 aa14.93□□□□□ -0.02
USH1C-203ENST00000526181 INO80B-WBP1J3KQ70 363 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 B4GALT5O43286 388 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 ERLIN2O94905 339 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 CDC25AP30304 524 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 LTBRP36941 435 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 RAB27AP51159 221 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 ERVFC1P60507 584 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 DLX2Q07687 328 aaPredicted RBP14.92□□□□□ -0.02
USH1C-203ENST00000526181 TFDP1Q14186 410 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 AMHR2Q16671 573 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 LEXMQ3ZCV2 418 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 HAUS3Q68CZ6 603 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 PADI6Q6TGC4 694 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 KCNT2Q6UVM3 1135 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 IGSF22Q8N9C0 903 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 SNX29Q8TEQ0 813 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 BSNDQ8WZ55 320 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 ZNF558Q96NG5 402 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 INPP5FQ9Y2H2 1132 aa14.92□□□□□ -0.02
USH1C-203ENST00000526181 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.92□□□□□ -0.02
USH1C-203ENST00000526181 ARHGEF35A5YM69 484 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 TNFRSF10AO00220 468 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 B4GALT3O60512 393 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 ZNF623O75123 536 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 OFD1O75665 1012 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 SKIP12755 728 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 IL9P15248 144 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 AFF1P51825 1210 aaKnown RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 CUL4AQ13619 759 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 CTC1Q2NKJ3 1217 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 RILPL1Q5EBL4 403 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 LARP1BQ659C4 914 aaKnown RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 AGMOQ6ZNB7 445 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 RBM23Q86U06 439 aaKnown RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 CDR2LQ86X02 465 aaPredicted RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 IFNLR1Q8IU57 520 aaPredicted RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 SMG8Q8ND04 991 aaKnown RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 EIF2AQ9BY44 585 aaKnown RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 MRPL9Q9BYD2 267 aaKnown RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 POLD4Q9HCU8 107 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 TLR9Q9NR96 1032 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 DDX19AQ9NUU7 478 aaKnown RBP14.91□□□□□ -0.02
USH1C-203ENST00000526181 TBC1D13Q9NVG8 400 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 KIAA1024Q9UPX6 916 aa14.91□□□□□ -0.02
USH1C-203ENST00000526181 LRRIQ4A6NIV6 560 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 NT5C1B-RDH14C9J2C7 533 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 E9PMD0 336 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 LAD1O00515 517 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 TBX10O75333 385 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 PRPHP41219 470 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 NRIP1P48552 1158 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 RBM10P98175 930 aaKnown RBP14.9□□□□□ -0.02
USH1C-203ENST00000526181 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
USH1C-203ENST00000526181 PLCB3Q01970 1234 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 POU5F1BQ06416 359 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 PDIA5Q14554 519 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 CLUL1Q15846 466 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 CSPP1Q1MSJ5 1256 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 NOMO2Q5JPE7 1267 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 PTCRAQ6ISU1 281 aaPredicted RBP14.9□□□□□ -0.02
USH1C-203ENST00000526181 GLB1LQ6UWU2 654 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 DTHD1Q6ZMT9 781 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 TMEM173Q86WV6 379 aaPredicted RBP14.9□□□□□ -0.02
USH1C-203ENST00000526181 SLC39A11Q8N1S5 342 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 MCPH1Q8NEM0 835 aa14.9□□□□□ -0.02
USH1C-203ENST00000526181 MICAL1Q8TDZ2 1067 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms