RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PLA2G12BQ9BX93 195 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 MSL2Q9HCI7 577 aa5.22□□□□□ -1.57
CD44-219ENST00000525685 PUF60Q9UHX1 559 aaKnown RBP5.22□□□□□ -1.57
CD44-219ENST00000525685 GOLGA8AA7E2F4 631 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 GOLGA8BA8MQT2 603 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 AKAP8O43823 692 aaKnown RBP5.21□□□□□ -1.58
CD44-219ENST00000525685 KDM1AO60341 852 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 C6P13671 934 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 TACR2P21452 398 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 CDKN1CP49918 316 aaPredicted RBP5.21□□□□□ -1.58
CD44-219ENST00000525685 MEOX1P50221 254 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 STAT5BP51692 787 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 HGFACQ04756 655 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 ADCY2Q08462 1091 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 LRRC32Q14392 662 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 PRKD1Q15139 912 aaPredicted RBP5.21□□□□□ -1.58
CD44-219ENST00000525685 TERF2Q15554 542 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 CREB3L3Q68CJ9 461 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 ESRP1Q6NXG1 681 aaKnown RBP5.21□□□□□ -1.58
CD44-219ENST00000525685 Q6ZSN1 163 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 POLNQ7Z5Q5 900 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 RASSF3Q86WH2 238 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 RTKN2Q8IZC4 609 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 COG1Q8WTW3 980 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 AHCYL2Q96HN2 611 aaKnown RBP5.21□□□□□ -1.58
CD44-219ENST00000525685 MAML3Q96JK9 1138 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 C16orf92Q96LL3 132 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 OR14A2Q96R54 314 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 ADOQ96SZ5 270 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 C12orf65Q9H3J6 166 aaKnown RBP5.21□□□□□ -1.58
CD44-219ENST00000525685 POFUT1Q9H488 388 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 WASHC2AQ641Q2 1341 aa5.21□□□□□ -1.58
CD44-219ENST00000525685 TDRD9Q8NDG6 1382 aaKnown RBP5.2□□□□□ -1.58
CD44-219ENST00000525685 RPS19P39019 145 aaKnown RBP5.2□□□□□ -1.58
CD44-219ENST00000525685 SCAND1P57086 179 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 PHC1P78364 1004 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 MAP3K12Q12852 859 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 GPR158Q5T848 1215 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 NECAB2Q7Z6G3 386 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 SLC16A11Q8NCK7 471 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 OR14K1Q8NGZ2 314 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 MYL10Q9BUA6 226 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 ANO3Q9BYT9 981 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 VPS11Q9H270 941 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 ZMAT4Q9H898 229 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 USP36Q9P275 1121 aaKnown RBP5.2□□□□□ -1.58
CD44-219ENST00000525685 SYNPO2Q9UMS6 1093 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 CHD1O14646 1710 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 SNAPC4Q5SXM2 1469 aa5.2□□□□□ -1.58
CD44-219ENST00000525685 KATNA1O75449 491 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 PRPF6O94906 941 aaKnown RBP5.19□□□□□ -1.58
CD44-219ENST00000525685 FSHBP01225 129 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 PRLP01236 227 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 AMHP03971 560 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 POU3F3P20264 500 aaPredicted RBP5.19□□□□□ -1.58
CD44-219ENST00000525685 ACO1P21399 889 aaKnown RBP5.19□□□□□ -1.58
CD44-219ENST00000525685 RGS3P49796 1198 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 BCAR1P56945 870 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 MAMDC4Q6UXC1 1216 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 AMOTL1Q8IY63 956 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 GPR135Q8IZ08 494 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 CNTD1Q8N815 330 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 CLRN3Q8NCR9 226 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 SMAD5Q99717 465 aaKnown RBP5.19□□□□□ -1.58
CD44-219ENST00000525685 PUS7LQ9H0K6 701 aaKnown RBP5.19□□□□□ -1.58
CD44-219ENST00000525685 MS4A5Q9H3V2 200 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 FAM184BQ9ULE4 1060 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 ADAMTS12P58397 1594 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 GRIN2BQ13224 1484 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 GAPVD1Q14C86 1478 aa5.19□□□□□ -1.58
CD44-219ENST00000525685 PHLDB1Q86UU1 1377 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 LCHNA4D1U4 455 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 PMS2P1A4D2B8 440 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 PRKD3O94806 890 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 CCND1P24385 295 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 FOXL1Q12952 345 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 CLUL1Q15846 466 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 CCDC62Q6P9F0 684 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 ZNF496Q96IT1 587 aaPredicted RBP5.18□□□□□ -1.58
CD44-219ENST00000525685 SCAND2PQ9GZW5 306 aaPredicted RBP5.18□□□□□ -1.58
CD44-219ENST00000525685 NELFAQ9H3P2 528 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 TOPORSQ9NS56 1045 aaPredicted RBP5.18□□□□□ -1.58
CD44-219ENST00000525685 C14orf119Q9NWQ9 140 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 PLA2G3Q9NZ20 509 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 VWA7Q9Y334 891 aa5.18□□□□□ -1.58
CD44-219ENST00000525685 CTDP1Q9Y5B0 961 aaPredicted RBP5.18□□□□□ -1.58
CD44-219ENST00000525685 MAGI1Q96QZ7 1491 aaPredicted RBP5.18□□□□□ -1.58
CD44-219ENST00000525685 PLSCR1O15162 318 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 SLC26A4O43511 780 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 PCDH8O95206 1070 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 CLEC2LP0C7M8 214 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 XPAP23025 273 aaPredicted RBP5.17□□□□□ -1.58
CD44-219ENST00000525685 ACVRL1P37023 503 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 UGT8Q16880 541 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 KIAA1841Q6NSI8 718 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 PGM2L1Q6PCE3 622 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 RNF207Q6ZRF8 634 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 TGFBRAP1Q8WUH2 860 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 FAM89AQ96GI7 184 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 ACAP3Q96P50 834 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms