RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 CDC25AP30304 524 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 POU5F1BQ06416 359 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 CLLU1OSQ5K130 101 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 SPOUT1Q5T280 376 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 IFNLR1Q8IU57 520 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 ABI1Q8IZP0 508 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 P2RX5Q93086 422 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 MMTAG2Q9BU76 263 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 BHMT2Q9H2M3 363 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 ALG13Q9NP73 1137 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 FAM105AQ9NUU6 356 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 TYW1Q9NV66 732 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 XIRP2A4UGR9 3374 aa20.54■□□□□ 0.88
TSPAN4-215ENST00000525334 ATG2AQ2TAZ0 1938 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 VWA3AA6NCI4 1184 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 INO80B-WBP1J3KQ70 363 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 ERLIN2O94905 339 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 SKIP12755 728 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 CYP11B2P19099 503 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 SYT1P21579 422 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 HOXA11P31270 313 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 RAB27AP51159 221 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 TFF2Q03403 129 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 MBTD1Q05BQ5 628 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 TIGD5Q53EQ6 642 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 NAALADL2Q58DX5 795 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 LRRC43Q8N309 656 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 KLHL23Q8NBE8 558 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 HELQQ8TDG4 1101 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 SNX21Q969T3 373 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 NFKBIZQ9BYH8 718 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 LMAN2LQ9H0V9 348 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 CWH43Q9H720 699 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 PLAGL2Q9UPG8 496 aa20.53■□□□□ 0.88
TSPAN4-215ENST00000525334 TSPAN1O60635 241 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 ITGB1P05556 798 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 PCBP1Q15365 356 aaKnown RBP eCLIP20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 AAK1Q2M2I8 961 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 LONRF3Q496Y0 759 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 ARL6IP4Q66PJ3 421 aaKnown RBP20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 LRRC55Q6ZSA7 311 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 LPPQ93052 612 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 HLA-CQ95604 372 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 AAASQ9NRG9 546 aa20.52■□□□□ 0.88
TSPAN4-215ENST00000525334 LRRIQ4A6NIV6 560 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 E9PMD0 336 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 ZNF623O75123 536 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 CSPG5O95196 566 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 BMP1P13497 986 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 AMHR2Q16671 573 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 UBXN11Q5T124 520 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 COLGALT1Q8NBJ5 622 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 BSNDQ8WZ55 320 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 PCDHB2Q9Y5E7 798 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 PCDHB12Q9Y5F1 795 aa20.51■□□□□ 0.87
TSPAN4-215ENST00000525334 MEIS3P2A8K0S8 358 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 EYA4O95677 639 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 LAG3P18627 525 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 DNAJB1P25685 340 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 RESTQ13127 1097 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 CAMK1Q14012 370 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 ZRSR1Q15695 479 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 TCEAL5Q5H9L2 206 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 KCNK18Q7Z418 384 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 SPPL3Q8TCT6 385 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 CPB2Q96IY4 423 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 NSUN3Q9H649 340 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 DNM3Q9UQ16 869 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 PLXNA4Q9HCM2 1894 aa20.5■□□□□ 0.87
TSPAN4-215ENST00000525334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 B4GALT5O43286 388 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 BMP15O95972 392 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 AXLP30530 894 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 SF3A1Q15459 793 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 HYIQ5T013 277 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 CDCA2Q69YH5 1023 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 NOTUMQ6P988 496 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 HSCBQ8IWL3 235 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 POF1BQ8WVV4 589 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 PNMA5Q96PV4 448 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 MRPL9Q9BYD2 267 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 MTMR6Q9Y217 621 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 MYO7AQ13402 2215 aa20.49■□□□□ 0.87
TSPAN4-215ENST00000525334 FGF18O76093 207 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 ARF4P18085 180 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 NCBP1Q09161 790 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 CSPP1Q1MSJ5 1256 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 GLB1LQ6UWU2 654 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 MRPL10Q7Z7H8 261 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 ZBTB8OSQ8IWT0 167 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 THNSL1Q8IYQ7 743 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 PGBD4Q96DM1 585 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 CCDC51Q96ER9 411 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 EIF2AQ9BY44 585 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 POLD4Q9HCU8 107 aa20.48■□□□□ 0.87
TSPAN4-215ENST00000525334 BRWD1Q9NSI6 2320 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 PBX3P40426 434 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 NAMPTP43490 491 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 KCNQ1P51787 676 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 FAM173BQ6P4H8 233 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms