RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 PLA2G4BP0C869 781 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 POU3F3P20264 500 aaPredicted RBP14.34□□□□□ -0.11
CTSB-209ENST00000525315 GUCY2CP25092 1073 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 AXLP30530 894 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 MBTD1Q05BQ5 628 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 AMHR2Q16671 573 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 CDCA2Q69YH5 1023 aaPredicted RBP14.34□□□□□ -0.11
CTSB-209ENST00000525315 CMTR2Q8IYT2 770 aaKnown RBP14.34□□□□□ -0.11
CTSB-209ENST00000525315 FIBCD1Q8N539 461 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 KRI1Q8N9T8 703 aaKnown RBP14.34□□□□□ -0.11
CTSB-209ENST00000525315 LRRC15Q8TF66 581 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 BSNDQ8WZ55 320 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 CLP1Q92989 425 aaKnown RBP14.34□□□□□ -0.11
CTSB-209ENST00000525315 CDK5RAP3Q96JB5 506 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 SAMD11Q96NU1 681 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 PLIN2Q99541 437 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 TIPINQ9BVW5 301 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 BLOC1S4Q9NUP1 217 aa14.34□□□□□ -0.11
CTSB-209ENST00000525315 SPTLC2O15270 562 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 YEATS4O95619 227 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 SKIP12755 728 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 DDIT3P35638 169 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 NAMPTP43490 491 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 MAPK7Q13164 816 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 BTG3Q14201 252 aaPredicted RBP14.33□□□□□ -0.12
CTSB-209ENST00000525315 ADGRE1Q14246 886 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 KARSQ15046 597 aaKnown RBP14.33□□□□□ -0.12
CTSB-209ENST00000525315 PPP2R5AQ15172 486 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 STK38Q15208 465 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 FAM187BQ17R55 369 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 ARSHQ5FYA8 562 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 SPECC1Q5M775 1068 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 DAW1Q8N136 415 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 ARNTL2Q8WYA1 636 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 C17orf80Q9BSJ5 609 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 RUSC1Q9BVN2 902 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 FZD8Q9H461 694 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 RNF19AQ9NV58 838 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 KCND2Q9NZV8 630 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 PIN4Q9Y237 131 aaKnown RBP14.33□□□□□ -0.12
CTSB-209ENST00000525315 ADGRA3Q8IWK6 1321 aa14.33□□□□□ -0.12
CTSB-209ENST00000525315 LRRIQ4A6NIV6 560 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 INO80B-WBP1J3KQ70 363 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 RFXAPO00287 272 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 TSPAN1O60635 241 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 LPXNO60711 386 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 ATF7P17544 494 aaPredicted RBP14.32□□□□□ -0.12
CTSB-209ENST00000525315 PLCG1P19174 1290 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 BMPR1AP36894 532 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 GATMP50440 423 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 EPC2Q52LR7 807 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 UBXN11Q5T124 520 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 TWF2Q6IBS0 349 aaKnown RBP14.32□□□□□ -0.12
CTSB-209ENST00000525315 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 MRPL10Q7Z7H8 261 aaKnown RBP14.32□□□□□ -0.12
CTSB-209ENST00000525315 TMEM192Q8IY95 271 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 RAD54LQ92698 747 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 SYMPKQ92797 1274 aaKnown RBP14.32□□□□□ -0.12
CTSB-209ENST00000525315 IFT74Q96LB3 600 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 PRIMPOLQ96LW4 560 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 GAS2L1Q99501 681 aaPredicted RBP14.32□□□□□ -0.12
CTSB-209ENST00000525315 NTPCRQ9BSD7 190 aaKnown RBP14.32□□□□□ -0.12
CTSB-209ENST00000525315 C2orf40Q9H1Z8 148 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 C17orf75Q9HAS0 396 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 FAM105AQ9NUU6 356 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 CFAP45Q9UL16 551 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 RWDD3Q9Y3V2 267 aa14.32□□□□□ -0.12
CTSB-209ENST00000525315 COL4A4P53420 1690 aaPredicted RBP14.31□□□□□ -0.12
CTSB-209ENST00000525315 A0A1B0GUA9 196 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 C5orf67F2Z3F1 127 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 HOXA2O43364 376 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 HIP1RO75146 1068 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 ERLIN2O94905 339 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 RB1P06400 928 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 FOSL2P15408 326 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 ARF4P18085 180 aaPredicted RBP14.31□□□□□ -0.12
CTSB-209ENST00000525315 RAB27AP51159 221 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 DNM1Q05193 864 aaKnown RBP14.31□□□□□ -0.12
CTSB-209ENST00000525315 NCBP1Q09161 790 aaKnown RBP14.31□□□□□ -0.12
CTSB-209ENST00000525315 ZBTB8OSQ8IWT0 167 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 CCDC51Q96ER9 411 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 DRC1Q96MC2 740 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 CASD1Q96PB1 797 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 TMEM117Q9H0C3 514 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 CCDC113Q9H0I3 377 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 PRMT7Q9NVM4 692 aaPredicted RBP14.31□□□□□ -0.12
CTSB-209ENST00000525315 CCDC39Q9UFE4 941 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 KCNG1Q9UIX4 513 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 RCOR1Q9UKL0 485 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 PCDHB2Q9Y5E7 798 aa14.31□□□□□ -0.12
CTSB-209ENST00000525315 MRPL42Q9Y6G3 142 aaKnown RBP14.31□□□□□ -0.12
CTSB-209ENST00000525315 PRRC2BQ5JSZ5 2229 aaKnown RBP14.31□□□□□ -0.12
CTSB-209ENST00000525315 EYSQ5T1H1 3165 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 REV3LO60673 3130 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 TBKBP1A7MCY6 615 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 SFI1A8K8P3 1242 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 H3BNC9 293 aa14.3□□□□□ -0.12
CTSB-209ENST00000525315 SSBP05455 408 aaKnown RBP eCLIP14.3□□□□□ -0.12
CTSB-209ENST00000525315 FGFR1P11362 822 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms