RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ADAM15Q13444 863 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 EFR3AQ14156 821 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 UAP1L1Q3KQV9 507 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 MMEL1Q495T6 779 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ANKRD39Q53RE8 183 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 HSP90B2PQ58FF3 399 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 GTF2IRD2BQ6EKJ0 949 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 C16orf87Q6PH81 154 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 FOXR1Q6PIV2 292 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 LRFN4Q6PJG9 635 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 KCNT2Q6UVM3 1135 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 HDXQ7Z353 690 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 KRT25Q7Z3Z0 450 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 CCDC91Q7Z6B0 441 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 SLC9B2Q86UD5 537 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 MTDHQ86UE4 582 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 GTF2IRD2Q86UP8 949 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 LIX1LQ8IVB5 337 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ZNF619Q8N2I2 560 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 TMEM151AQ8N4L1 468 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ARHGEF39Q8N4T4 335 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 TCP11L2Q8N4U5 519 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 TTLL11Q8NHH1 800 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 GSDMBQ8TAX9 411 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 SPPL3Q8TCT6 385 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 TGFBRAP1Q8WUH2 860 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 GIMAP1Q8WWP7 306 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 TTC9Q92623 222 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 COA7Q96BR5 231 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ZNF845Q96IR2 970 aaPredicted RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 CNDP2Q96KP4 475 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 YME1L1Q96TA2 773 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 CGRRF1Q99675 332 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 STK33Q9BYT3 514 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 EDEM3Q9BZQ6 932 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ZDHHC5Q9C0B5 715 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ADAM19Q9H013 955 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 SIL1Q9H173 461 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 NUCKS1Q9H1E3 243 aaKnown RBP5.01□□□□□ -1.61
CD44-213ENST00000525209 BRD7Q9NPI1 651 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 HPF1Q9NWY4 346 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 DNAJC28Q9NX36 388 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 WHRNQ9P202 907 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ADAM30Q9UKF2 790 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 SRPK3Q9UPE1 567 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ZNF451Q9Y4E5 1061 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 CEP83Q9Y592 693 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 PCDHGB5Q9Y5G0 923 aa5.01□□□□□ -1.61
CD44-213ENST00000525209 ATAD2BQ9ULI0 1458 aa5□□□□□ -1.61
CD44-213ENST00000525209 FLT1P17948 1338 aa5□□□□□ -1.61
CD44-213ENST00000525209 ERICH4A6NGS2 130 aa5□□□□□ -1.61
CD44-213ENST00000525209 H7C1W4 665 aa5□□□□□ -1.61
CD44-213ENST00000525209 STXBP3O00186 592 aa5□□□□□ -1.61
CD44-213ENST00000525209 APOL1O14791 398 aa5□□□□□ -1.61
CD44-213ENST00000525209 RGS13O14921 159 aa5□□□□□ -1.61
CD44-213ENST00000525209 FSCN2O14926 492 aa5□□□□□ -1.61
CD44-213ENST00000525209 TSPAN3O60637 253 aa5□□□□□ -1.61
CD44-213ENST00000525209 PTP4A3O75365 173 aa5□□□□□ -1.61
CD44-213ENST00000525209 USP2O75604 605 aaPredicted RBP5□□□□□ -1.61
CD44-213ENST00000525209 TPPPO94811 219 aa5□□□□□ -1.61
CD44-213ENST00000525209 TMEM63AO94886 807 aa5□□□□□ -1.61
CD44-213ENST00000525209 IL18RAPO95256 599 aa5□□□□□ -1.61
CD44-213ENST00000525209 KCNH1O95259 989 aa5□□□□□ -1.61
CD44-213ENST00000525209 GUCA1CO95843 209 aa5□□□□□ -1.61
CD44-213ENST00000525209 RARAP10276 462 aa5□□□□□ -1.61
CD44-213ENST00000525209 PTPRAP18433 802 aa5□□□□□ -1.61
CD44-213ENST00000525209 HDCP19113 662 aa5□□□□□ -1.61
CD44-213ENST00000525209 CTSSP25774 331 aa5□□□□□ -1.61
CD44-213ENST00000525209 SLC12A2P55011 1212 aa5□□□□□ -1.61
CD44-213ENST00000525209 ARF3P61204 181 aaPredicted RBP5□□□□□ -1.61
CD44-213ENST00000525209 ARF1P84077 181 aaKnown RBP5□□□□□ -1.61
CD44-213ENST00000525209 CCINQ13939 588 aa5□□□□□ -1.61
CD44-213ENST00000525209 PTK2BQ14289 1009 aa5□□□□□ -1.61
CD44-213ENST00000525209 SF3B3Q15393 1217 aaKnown RBP5□□□□□ -1.61
CD44-213ENST00000525209 SMAD1Q15797 465 aaKnown RBP5□□□□□ -1.61
CD44-213ENST00000525209 ARHGAP44Q17R89 818 aa5□□□□□ -1.61
CD44-213ENST00000525209 SLC35G1Q2M3R5 365 aa5□□□□□ -1.61
CD44-213ENST00000525209 ODF2Q5BJF6 829 aa5□□□□□ -1.61
CD44-213ENST00000525209 ARSJQ5FYB0 599 aaPredicted RBP5□□□□□ -1.61
CD44-213ENST00000525209 LRCH2Q5VUJ6 765 aa5□□□□□ -1.61
CD44-213ENST00000525209 DCAF15Q66K64 600 aa5□□□□□ -1.61
CD44-213ENST00000525209 GPR139Q6DWJ6 353 aa5□□□□□ -1.61
CD44-213ENST00000525209 IRGCQ6NXR0 463 aa5□□□□□ -1.61
CD44-213ENST00000525209 ALKBH5Q6P6C2 394 aaKnown RBP5□□□□□ -1.61
CD44-213ENST00000525209 CCBE1Q6UXH8 406 aaPredicted RBP5□□□□□ -1.61
CD44-213ENST00000525209 KIAA1211Q6ZU35 1233 aa5□□□□□ -1.61
CD44-213ENST00000525209 B4GALNT4Q76KP1 1039 aa5□□□□□ -1.61
CD44-213ENST00000525209 OVCH1Q7RTY7 1134 aa5□□□□□ -1.61
CD44-213ENST00000525209 SLC44A2Q8IWA5 706 aaPredicted RBP5□□□□□ -1.61
CD44-213ENST00000525209 OR8H3Q8N146 312 aa5□□□□□ -1.61
CD44-213ENST00000525209 ZNF610Q8N9Z0 462 aa5□□□□□ -1.61
CD44-213ENST00000525209 CREB3L4Q8TEY5 395 aa5□□□□□ -1.61
CD44-213ENST00000525209 ZNF606Q8WXB4 792 aa5□□□□□ -1.61
CD44-213ENST00000525209 TAF4BQ92750 862 aa5□□□□□ -1.61
CD44-213ENST00000525209 BRF1Q92994 677 aa5□□□□□ -1.61
CD44-213ENST00000525209 ACDQ96AP0 544 aa5□□□□□ -1.61
CD44-213ENST00000525209 UROC1Q96N76 676 aa5□□□□□ -1.61
CD44-213ENST00000525209 ZFYVE21Q9BQ24 234 aa5□□□□□ -1.61
CD44-213ENST00000525209 PDCD2LQ9BRP1 358 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms